RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ZMAT4Q9H898 229 aa17.96■□□□□ 0.47
TMEM260-207ENST00000555497 DEFB131AP59861 70 aa17.96■□□□□ 0.47
TMEM260-207ENST00000555497 FOXC2Q99958 501 aa17.96■□□□□ 0.47
TMEM260-207ENST00000555497 A0A087WWL8 130 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 C2orf91Q6ZV80 131 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 TEX29Q8N6K0 151 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 IGHV1OR15-1A0A075B7D0 117 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 NUDT3O95989 172 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 VAMP3Q15836 100 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 BVES-AS1Q5T3Y7 98 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 PEMTQ9UBM1 199 aa17.95■□□□□ 0.46
TMEM260-207ENST00000555497 TAX1BP3O14907 124 aa17.94■□□□□ 0.46
TMEM260-207ENST00000555497 RBMY1A1P0DJD3 496 aaKnown RBP17.94■□□□□ 0.46
TMEM260-207ENST00000555497 RBMY1CP0DJD4 496 aa17.94■□□□□ 0.46
TMEM260-207ENST00000555497 RBMY1FQ15415 496 aaKnown RBP17.94■□□□□ 0.46
TMEM260-207ENST00000555497 C11orf44Q8N8P7 122 aa17.94■□□□□ 0.46
TMEM260-207ENST00000555497 ATP5LO75964 103 aa17.93■□□□□ 0.46
TMEM260-207ENST00000555497 C12orf54Q6X4T0 127 aa17.92■□□□□ 0.46
TMEM260-207ENST00000555497 HHLA3Q9XRX5 114 aa17.92■□□□□ 0.46
TMEM260-207ENST00000555497 RBMY1BA6NDE4 496 aaKnown RBP17.91■□□□□ 0.46
TMEM260-207ENST00000555497 RBMY1EA6NEQ0 496 aaKnown RBP17.91■□□□□ 0.46
TMEM260-207ENST00000555497 RBMY1DP0C7P1 496 aaKnown RBP17.91■□□□□ 0.46
TMEM260-207ENST00000555497 SUMO4Q6EEV6 95 aa17.91■□□□□ 0.46
TMEM260-207ENST00000555497 NEGR1Q7Z3B1 354 aa17.91■□□□□ 0.46
TMEM260-207ENST00000555497 YAE1D1Q9NRH1 226 aa17.91■□□□□ 0.46
TMEM260-207ENST00000555497 RAX2Q96IS3 184 aa17.91■□□□□ 0.46
TMEM260-207ENST00000555497 CSTL1Q9H114 145 aa17.91■□□□□ 0.46
TMEM260-207ENST00000555497 H3BMM0 161 aa17.9■□□□□ 0.46
TMEM260-207ENST00000555497 A8MTW9 85 aa17.9■□□□□ 0.46
TMEM260-207ENST00000555497 HLA-DRB4P13762 266 aa17.9■□□□□ 0.46
TMEM260-207ENST00000555497 DEFB114Q30KQ6 69 aa17.9■□□□□ 0.46
TMEM260-207ENST00000555497 ORMDL2Q53FV1 153 aa17.9■□□□□ 0.46
TMEM260-207ENST00000555497 HLA-DRB4X5D2U9 266 aa17.9■□□□□ 0.46
TMEM260-207ENST00000555497 BOD1L2Q8IYS8 172 aa17.89■□□□□ 0.45
TMEM260-207ENST00000555497 TOMM6Q96B49 74 aa17.89■□□□□ 0.45
TMEM260-207ENST00000555497 TRAV2A0A0B4J234 112 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 A0A1W2PRX2 142 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 PCP2Q8IVA1 136 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 WNK1Q9H4A3 2382 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 IGKCP01834 107 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 CD28P10747 220 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 DYNLRB2Q8TF09 96 aa17.88■□□□□ 0.45
TMEM260-207ENST00000555497 MRPL35Q9NZE8 188 aaKnown RBP17.88■□□□□ 0.45
TMEM260-207ENST00000555497 ANK3Q12955 4377 aaKnown RBP17.88■□□□□ 0.45
TMEM260-207ENST00000555497 UNC79Q9P2D8 2635 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 F5H697 171 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 PPP1R17O96001 155 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 CD300EQ496F6 205 aaPredicted RBP17.87■□□□□ 0.45
TMEM260-207ENST00000555497 DEFB104AQ8WTQ1 72 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 IGKV2D-26A0A0A0MRZ7 120 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 CRYGDP07320 174 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 FAM74A4Q5TZK3 123 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 ERASQ7Z444 233 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 MAP6D1Q9H9H5 199 aa17.87■□□□□ 0.45
TMEM260-207ENST00000555497 NMUP48645 174 aa17.86■□□□□ 0.45
TMEM260-207ENST00000555497 MTORP42345 2549 aa17.86■□□□□ 0.45
TMEM260-207ENST00000555497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.86■□□□□ 0.45
TMEM260-207ENST00000555497 DPM2O94777 84 aa17.86■□□□□ 0.45
TMEM260-207ENST00000555497 PRM2P04554 102 aa17.86■□□□□ 0.45
TMEM260-207ENST00000555497 A0A087WX48 190 aa17.85■□□□□ 0.45
TMEM260-207ENST00000555497 K7EMI3 77 aa17.85■□□□□ 0.45
TMEM260-207ENST00000555497 POLR2KP53803 58 aaKnown RBP17.85■□□□□ 0.45
TMEM260-207ENST00000555497 SCGB3A1Q96QR1 104 aa17.85■□□□□ 0.45
TMEM260-207ENST00000555497 C2orf66Q6UXQ4 117 aa17.84■□□□□ 0.45
TMEM260-207ENST00000555497 SYT8Q8NBV8 401 aa17.84■□□□□ 0.45
TMEM260-207ENST00000555497 TMEM160Q9NX00 188 aa17.84■□□□□ 0.45
TMEM260-207ENST00000555497 CBY3A6NI87 242 aa17.84■□□□□ 0.45
TMEM260-207ENST00000555497 ZNF256Q9Y2P7 627 aaPredicted RBP17.84■□□□□ 0.45
TMEM260-207ENST00000555497 HTN1P15515 57 aa17.83■□□□□ 0.45
TMEM260-207ENST00000555497 FHL3Q13643 280 aa17.83■□□□□ 0.45
TMEM260-207ENST00000555497 MORN3Q6PF18 240 aaPredicted RBP17.83■□□□□ 0.45
TMEM260-207ENST00000555497 GTSCR1Q86UQ5 136 aa17.83■□□□□ 0.45
TMEM260-207ENST00000555497 SETD2Q9BYW2 2564 aaPredicted RBP17.83■□□□□ 0.45
TMEM260-207ENST00000555497 RPL32P62910 135 aaKnown RBP17.83■□□□□ 0.44
TMEM260-207ENST00000555497 ZNF876PQ49A33 203 aa17.83■□□□□ 0.44
TMEM260-207ENST00000555497 TRGV11A0A075B6L2 103 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 AMMECR1LQ6DCA0 310 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 TTTY13Q9BZ97 58 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 CST9LQ9H4G1 147 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 RNF151Q2KHN1 245 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 ZC2HC1BQ5TFG8 222 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 LINC01006Q8NI28 216 aa17.82■□□□□ 0.44
TMEM260-207ENST00000555497 CITED2Q99967 270 aaPredicted RBP17.82■□□□□ 0.44
TMEM260-207ENST00000555497 CCL24O00175 119 aa17.81■□□□□ 0.44
TMEM260-207ENST00000555497 COTL1Q14019 142 aa17.81■□□□□ 0.44
TMEM260-207ENST00000555497 M0QY20 66 aa17.8■□□□□ 0.44
TMEM260-207ENST00000555497 ZNF56Q15929 161 aa17.8■□□□□ 0.44
TMEM260-207ENST00000555497 TRAV12-1A0A0B4J245 112 aa17.8■□□□□ 0.44
TMEM260-207ENST00000555497 NEXN-AS1Q8NBZ9 246 aa17.8■□□□□ 0.44
TMEM260-207ENST00000555497 SDHAF1A6NFY7 115 aa17.79■□□□□ 0.44
TMEM260-207ENST00000555497 RNASE1P07998 156 aaKnown RBP17.79■□□□□ 0.44
TMEM260-207ENST00000555497 OCIAD2Q56VL3 154 aa17.79■□□□□ 0.44
TMEM260-207ENST00000555497 ZFP2Q6ZN57 461 aa17.79■□□□□ 0.44
TMEM260-207ENST00000555497 TRBV6-5A0A0K0K1A5 114 aa17.78■□□□□ 0.44
TMEM260-207ENST00000555497 TMEM97Q5BJF2 176 aa17.78■□□□□ 0.44
TMEM260-207ENST00000555497 BAALCQ8WXS3 180 aa17.78■□□□□ 0.44
TMEM260-207ENST00000555497 SPAG8Q99932 426 aaPredicted RBP17.78■□□□□ 0.44
TMEM260-207ENST00000555497 FASNP49327 2511 aaKnown RBP17.78■□□□□ 0.44
TMEM260-207ENST00000555497 VCYO14598 125 aa17.78■□□□□ 0.44
TMEM260-207ENST00000555497 H7C1H1 209 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms