RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 C15orf32Q32M92 178 aa8.42□□□□□ -1.06
VPS33B-204ENST00000554660 C9orf47Q6ZRZ4 202 aa8.42□□□□□ -1.06
VPS33B-204ENST00000554660 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
VPS33B-204ENST00000554660 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 hDV102S1A0JD36 115 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 IGHV3-23P01764 117 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 HLA-DRB4P13762 266 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 GPR183P32249 361 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 CKS2P33552 79 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 IFI27P40305 119 aaPredicted RBP8.41□□□□□ -1.06
VPS33B-204ENST00000554660 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 CACNG7P62955 275 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 KIR3DS1Q14943 382 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 DEFB135Q30KP9 77 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 AMN1Q8IY45 258 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 METTL26Q96S19 204 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 SMPXQ9UHP9 88 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 HLA-DRB4X5D2U9 266 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 ABCA13Q86UQ4 5058 aa8.41□□□□□ -1.06
VPS33B-204ENST00000554660 BOD1L2Q8IYS8 172 aa8.4□□□□□ -1.06
VPS33B-204ENST00000554660 IFI27L1Q96BM0 104 aa8.4□□□□□ -1.06
VPS33B-204ENST00000554660 RNF185Q96GF1 192 aa8.4□□□□□ -1.06
VPS33B-204ENST00000554660 CCDC140Q96MF4 163 aa8.4□□□□□ -1.06
VPS33B-204ENST00000554660 VGLL1Q99990 258 aa8.4□□□□□ -1.06
VPS33B-204ENST00000554660 KLK5Q9Y337 293 aaPredicted RBP8.4□□□□□ -1.06
VPS33B-204ENST00000554660 S4R3C0 116 aa8.4□□□□□ -1.06
VPS33B-204ENST00000554660 K7EMI3 77 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 LGALS9O00182 355 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 SNAI2O43623 268 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 NUDT3O95989 172 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 MED14OSP0DP75 135 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 FGF6P10767 208 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 FCER1GP30273 86 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
VPS33B-204ENST00000554660 ZNF138P52744 262 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 TWIST1Q15672 202 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 MPV17L2Q567V2 206 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 SMIM15Q7Z3B0 74 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 ZNF575Q86XF7 245 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 TPPP3Q9BW30 176 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 DNAH6Q9C0G6 4158 aa8.39□□□□□ -1.07
VPS33B-204ENST00000554660 SPRY2O43597 315 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 ATP5LO75964 103 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 NPYP01303 97 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 CLEC3BP05452 202 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 ARL3P36405 182 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 HSD52Q0P140 79 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 TM4SF20Q53R12 229 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 TMEM78Q5T7P6 136 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 SAMD13Q5VXD3 122 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 C2orf91Q6ZV80 131 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 WFDC3Q8IUB2 231 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 Q8N8P6 123 aa8.38□□□□□ -1.07
VPS33B-204ENST00000554660 A6NDN8 102 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 CCL25O15444 150 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 ORM1P02763 201 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 Q8TAT8 98 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 PHLDA1Q8WV24 401 aaPredicted RBP8.37□□□□□ -1.07
VPS33B-204ENST00000554660 MRAP2Q96G30 205 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 HIGD1BQ9P298 99 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 TP53TG1Q9Y2A0 90 aa8.37□□□□□ -1.07
VPS33B-204ENST00000554660 TMSB15BA0A087X1C1 80 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 TRAV8-2A0A0B4J237 113 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 NDUFA4O00483 81 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 TNFRSF6BO95407 300 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 APOC4P55056 127 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 TMEM97Q5BJF2 176 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 UNQ9165/PRO28630Q6UXU0 137 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 GPHB5Q86YW7 130 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 OR8A1Q8NGG7 326 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 GLMPQ8WWB7 406 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 LINC00477Q96M19 166 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 AGPAT4-IT1Q9H0P7 198 aa8.36□□□□□ -1.07
VPS33B-204ENST00000554660 FAT2Q9NYQ8 4349 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 LINC01549A6NIU2 74 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 H3BRM9 83 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 NCR2O95944 276 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 EVI2AP22794 236 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 APRG1Q8IVJ8 170 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 PKHD1P08F94 4074 aa8.35□□□□□ -1.07
VPS33B-204ENST00000554660 IGLV2-18A0A075B6J9 118 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 IGKV3D-20A0A0C4DH25 116 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 IGHV3-35A0A0C4DH35 117 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 MUC21A0A0G2JKD1 596 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 IGHV7-4-1A0A0J9YVY3 117 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 MUC21A0A140T8X8 626 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 LOC389332A0A1B0GUA5 103 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 C7orf71A4D174 169 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 PPP1R17O96001 155 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 RPL35AP18077 110 aaKnown RBP8.34□□□□□ -1.07
VPS33B-204ENST00000554660 VAMP3Q15836 100 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 FAM106AQ4KMX7 169 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 ANKRD39Q53RE8 183 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 MUC21Q5SSG8 566 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 OR4C5Q8NGB2 326 aa8.34□□□□□ -1.07
VPS33B-204ENST00000554660 RNF183Q96D59 192 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms