RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CRYGDP07320 174 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 KRTAP1-3Q8IUG1 177 aa13.11□□□□□ -0.31
SCARB1-208ENST00000544327 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
SCARB1-208ENST00000544327 ACACBO00763 2458 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 FBN2P35556 2912 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 UFSP1Q6NVU6 142 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 TMEM141Q96I45 108 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 Q96MF0 132 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 KIR2DL4Q99706 377 aa13.1□□□□□ -0.31
SCARB1-208ENST00000544327 F5H697 171 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 M0QY20 66 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 GCSHP23434 173 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 FXYD2P54710 66 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 SLURP1P55000 103 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 NEGR1Q7Z3B1 354 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 CEND1Q8N111 149 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 TMEM86BQ8N661 226 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 C4orf3Q8WVX3 66 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 TIMM17AQ99595 171 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 SDHAF1A6NFY7 115 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 E9PLD3 99 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 SMIM13P0DJ93 91 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 GTF2H5Q6ZYL4 71 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
SCARB1-208ENST00000544327 ANKRD17O75179 2603 aaKnown RBP13.08□□□□□ -0.31
SCARB1-208ENST00000544327 OR11H12B2RN74 326 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 H3BUT2 72 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 TSHBP01222 138 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 MORN3Q6PF18 240 aaPredicted RBP13.08□□□□□ -0.32
SCARB1-208ENST00000544327 C18orf65Q6ZTR6 163 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 OR11H1Q8NG94 326 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 OR11H2Q8NH07 326 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 PEMTQ9UBM1 199 aa13.08□□□□□ -0.32
SCARB1-208ENST00000544327 MYMXA0A1B0GTQ4 84 aa13.07□□□□□ -0.32
SCARB1-208ENST00000544327 GAGE10A6NGK3 116 aa13.07□□□□□ -0.32
SCARB1-208ENST00000544327 RHOHQ15669 191 aa13.07□□□□□ -0.32
SCARB1-208ENST00000544327 PAPPA-AS1Q5QFB9 102 aa13.07□□□□□ -0.32
SCARB1-208ENST00000544327 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
SCARB1-208ENST00000544327 RNASE8Q8TDE3 154 aaKnown RBP13.07□□□□□ -0.32
SCARB1-208ENST00000544327 EDA2RQ9HAV5 297 aa13.07□□□□□ -0.32
SCARB1-208ENST00000544327 USP24Q9UPU5 2620 aa13.07□□□□□ -0.32
SCARB1-208ENST00000544327 K7EP34 96 aa13.06□□□□□ -0.32
SCARB1-208ENST00000544327 UBR5O95071 2799 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-208ENST00000544327 NSUN5P1Q3KNT7 163 aa13.06□□□□□ -0.32
SCARB1-208ENST00000544327 A0A1W2PPM0 123 aa13.06□□□□□ -0.32
SCARB1-208ENST00000544327 TEX29Q8N6K0 151 aa13.06□□□□□ -0.32
SCARB1-208ENST00000544327 PHLDA1Q8WV24 401 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-208ENST00000544327 H3BMM0 161 aa13.05□□□□□ -0.32
SCARB1-208ENST00000544327 PMVKQ15126 192 aa13.05□□□□□ -0.32
SCARB1-208ENST00000544327 ZNF56Q15929 161 aa13.05□□□□□ -0.32
SCARB1-208ENST00000544327 DEFB136Q30KP8 78 aa13.05□□□□□ -0.32
SCARB1-208ENST00000544327 FAM74A4Q5TZK3 123 aa13.05□□□□□ -0.32
SCARB1-208ENST00000544327 IGLV4-69A0A075B6H9 119 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 RBMY1A1P0DJD3 496 aaKnown RBP13.04□□□□□ -0.32
SCARB1-208ENST00000544327 RBMY1CP0DJD4 496 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 DEFB131AP59861 70 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 RBMY1FQ15415 496 aaKnown RBP13.04□□□□□ -0.32
SCARB1-208ENST00000544327 TRBV7-3A0A075B6L6 115 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 KNCNA6PVL3 124 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 ZNF876PQ49A33 203 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 RAB37Q96AX2 223 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 SPAG8Q99932 426 aaPredicted RBP13.04□□□□□ -0.32
SCARB1-208ENST00000544327 PRADC1Q9BSG0 188 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 CST9LQ9H4G1 147 aa13.04□□□□□ -0.32
SCARB1-208ENST00000544327 MYO18BQ8IUG5 2567 aa13.03□□□□□ -0.32
SCARB1-208ENST00000544327 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
SCARB1-208ENST00000544327 PTH2Q96A98 100 aa13.03□□□□□ -0.32
SCARB1-208ENST00000544327 GAGE12BA1L429 117 aa13.02□□□□□ -0.32
SCARB1-208ENST00000544327 OR5A1Q8NGJ0 315 aa13.02□□□□□ -0.32
SCARB1-208ENST00000544327 CRYBG3Q68DQ2 2970 aa13.02□□□□□ -0.32
SCARB1-208ENST00000544327 UTP20O75691 2785 aaKnown RBP13.02□□□□□ -0.33
SCARB1-208ENST00000544327 ZNF462Q96JM2 2506 aa13.02□□□□□ -0.33
SCARB1-208ENST00000544327 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.33
SCARB1-208ENST00000544327 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.33
SCARB1-208ENST00000544327 C11orf86A6NJI1 115 aa13.02□□□□□ -0.33
SCARB1-208ENST00000544327 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.33
SCARB1-208ENST00000544327 RBX1P62877 108 aa13.02□□□□□ -0.33
SCARB1-208ENST00000544327 RPL39P62891 51 aaKnown RBP13.02□□□□□ -0.33
SCARB1-208ENST00000544327 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.33
SCARB1-208ENST00000544327 TMEM61Q8N0U2 210 aa13.02□□□□□ -0.33
SCARB1-208ENST00000544327 LINC00467Q9BRT7 94 aa13.02□□□□□ -0.33
SCARB1-208ENST00000544327 AGRNO00468 2067 aa13.01□□□□□ -0.33
SCARB1-208ENST00000544327 FABP2P12104 132 aa13□□□□□ -0.33
SCARB1-208ENST00000544327 HERVK_113P61574 105 aa13□□□□□ -0.33
SCARB1-208ENST00000544327 DLX4Q92988 240 aaPredicted RBP13□□□□□ -0.33
SCARB1-208ENST00000544327 HIST1H4GQ99525 98 aa13□□□□□ -0.33
SCARB1-208ENST00000544327 NAA38Q9BRA0 125 aaKnown RBP13□□□□□ -0.33
SCARB1-208ENST00000544327 I3L3M4 83 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 MAP6D1Q9H9H5 199 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 NHP2Q9NX24 153 aaKnown RBP12.99□□□□□ -0.33
SCARB1-208ENST00000544327 SPCS1Q9Y6A9 102 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 A0A1B0GWB2 263 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 PCP4P48539 62 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 DEFB114Q30KQ6 69 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 Q6ZSV7 163 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
SCARB1-208ENST00000544327 USP9YO00507 2555 aaPredicted RBP12.99□□□□□ -0.33
SCARB1-208ENST00000544327 K7ERJ3 54 aa12.98□□□□□ -0.33
SCARB1-208ENST00000544327 P0DMU3 169 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms