RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 MRPL35Q9NZE8 188 aaKnown RBP11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 F5H697 171 aa11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 SPINK13Q1W4C9 94 aa11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 NRACQ8N912 160 aa11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 C20orf78Q9BR46 151 aa11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 NBEAL2Q6ZNJ1 2754 aa11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 SOCS3O14543 225 aa11.86□□□□□ -0.51
SNRNP70-203ENST00000544278 RBAKDNA6NC62 111 aa11.85□□□□□ -0.51
SNRNP70-203ENST00000544278 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
SNRNP70-203ENST00000544278 CD7P09564 240 aa11.85□□□□□ -0.51
SNRNP70-203ENST00000544278 TMEM8BA6NDV4 472 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 SETXQ7Z333 2677 aaKnown RBP11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 IGHV4OR15-8A0A075B7B6 117 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 A0A087WW49 117 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 IGHV3-73A0A0B4J1V6 119 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 ASIPP42127 132 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
SNRNP70-203ENST00000544278 CNFNQ9BYD5 112 aa11.83□□□□□ -0.52
SNRNP70-203ENST00000544278 TRAV21A0A0B4J279 112 aa11.83□□□□□ -0.52
SNRNP70-203ENST00000544278 MDFICQ9P1T7 246 aa11.83□□□□□ -0.52
SNRNP70-203ENST00000544278 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 RNASE3P12724 160 aaKnown RBP11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 COX6B1P14854 86 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 RASL10AQ92737 203 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 J3QR89 54 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 SLURP1P55000 103 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 LGALS9CQ6DKI2 356 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 USMG5Q96IX5 58 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 IGLV2-18A0A075B6J9 118 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 DPF1Q92782 380 aa11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 SPANXB1Q9NS25 103 aaPredicted RBP11.82□□□□□ -0.52
SNRNP70-203ENST00000544278 GCN1Q92616 2671 aaKnown RBP11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 Q8N8P6 123 aa11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 A0A1W2PRX2 142 aa11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 LAGE3Q14657 143 aa11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 LINC01356Q8N9X3 169 aa11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 NXT2Q9NPJ8 142 aaKnown RBP11.81□□□□□ -0.52
SNRNP70-203ENST00000544278 ZNF256Q9Y2P7 627 aaPredicted RBP11.8□□□□□ -0.52
SNRNP70-203ENST00000544278 PSMB8P28062 276 aa11.8□□□□□ -0.52
SNRNP70-203ENST00000544278 FAM159AQ6UWV7 190 aa11.8□□□□□ -0.52
SNRNP70-203ENST00000544278 MAPKAPK5-AS1Q8N8E1 139 aa11.8□□□□□ -0.52
SNRNP70-203ENST00000544278 RPL39P62891 51 aaKnown RBP11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 DCANP1Q8TF63 244 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 OVOL1O14753 267 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 SYT8Q8NBV8 401 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 MYOZ3Q8TDC0 251 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 HHLA3Q9XRX5 114 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 IGKCP01834 107 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 Q96MF0 132 aa11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 CITED2Q99967 270 aaPredicted RBP11.79□□□□□ -0.52
SNRNP70-203ENST00000544278 CR1P17927 2039 aa11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 RNF183Q96D59 192 aa11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 SMIM2Q9BVW6 85 aa11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 SUMO2P61956 95 aaKnown RBP11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 OPRPNQ99935 248 aaPredicted RBP11.78□□□□□ -0.52
SNRNP70-203ENST00000544278 KLK9Q2XQG4 91 aa11.77□□□□□ -0.52
SNRNP70-203ENST00000544278 PTH2Q96A98 100 aa11.77□□□□□ -0.52
SNRNP70-203ENST00000544278 SCGB3A1Q96QR1 104 aa11.77□□□□□ -0.52
SNRNP70-203ENST00000544278 CHAC1Q9BUX1 264 aa11.77□□□□□ -0.52
SNRNP70-203ENST00000544278 CRIP2P52943 208 aaPredicted RBP11.77□□□□□ -0.53
SNRNP70-203ENST00000544278 CFHR3Q02985 330 aa11.77□□□□□ -0.53
SNRNP70-203ENST00000544278 OR9G4Q8NGQ1 327 aa11.77□□□□□ -0.53
SNRNP70-203ENST00000544278 UNC79Q9P2D8 2635 aa11.77□□□□□ -0.53
SNRNP70-203ENST00000544278 DUSP14O95147 198 aaKnown RBP11.77□□□□□ -0.53
SNRNP70-203ENST00000544278 ZNF843Q8N446 348 aa11.77□□□□□ -0.53
SNRNP70-203ENST00000544278 GAGE13Q4V321 117 aa11.76□□□□□ -0.53
SNRNP70-203ENST00000544278 ZNF418Q8TF45 676 aaPredicted RBP11.76□□□□□ -0.53
SNRNP70-203ENST00000544278 MRAP2Q96G30 205 aa11.76□□□□□ -0.53
SNRNP70-203ENST00000544278 CITED1Q99966 193 aa11.76□□□□□ -0.53
SNRNP70-203ENST00000544278 MRPL53Q96EL3 112 aaKnown RBP11.76□□□□□ -0.53
SNRNP70-203ENST00000544278 DPH3P1Q9H4G8 78 aa11.76□□□□□ -0.53
SNRNP70-203ENST00000544278 Q9UF83 564 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 P0DMU3 169 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 FAM231AP0DMU4 169 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 FAM231CP0DMU5 169 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 PROK1P58294 105 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 A0A096LNT2 108 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 B5MCH6 92 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 DPM2O94777 84 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 APOMO95445 188 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 IGHV4-31P0DP07 118 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 C2orf66Q6UXQ4 117 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 Q8N1Y9 231 aa11.75□□□□□ -0.53
SNRNP70-203ENST00000544278 SCGB1A1P11684 91 aa11.74□□□□□ -0.53
SNRNP70-203ENST00000544278 ZNF56Q15929 161 aa11.74□□□□□ -0.53
SNRNP70-203ENST00000544278 SRSF2Q01130 221 aaKnown RBP11.74□□□□□ -0.53
SNRNP70-203ENST00000544278 TCTEX1D4Q5JR98 221 aa11.74□□□□□ -0.53
SNRNP70-203ENST00000544278 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
SNRNP70-203ENST00000544278 TRBV25-1A0A075B6N4 114 aa11.73□□□□□ -0.53
SNRNP70-203ENST00000544278 IGLL5B9A064 214 aa11.73□□□□□ -0.53
SNRNP70-203ENST00000544278 DEFB131AP59861 70 aa11.73□□□□□ -0.53
SNRNP70-203ENST00000544278 FOXI2Q6ZQN5 318 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms