RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 VWFP04275 2813 aa14.42□□□□□ -0.1
COPS7A-218ENST00000543939 SCGB1D1O95968 90 aa14.42□□□□□ -0.1
COPS7A-218ENST00000543939 C3orf79P0CE67 100 aa14.42□□□□□ -0.1
COPS7A-218ENST00000543939 RASL10AQ92737 203 aa14.42□□□□□ -0.1
COPS7A-218ENST00000543939 NXT2Q9NPJ8 142 aaKnown RBP14.42□□□□□ -0.1
COPS7A-218ENST00000543939 IGLV2-18A0A075B6J9 118 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 A0A087WWL8 130 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 MORN3Q6PF18 240 aaPredicted RBP14.41□□□□□ -0.1
COPS7A-218ENST00000543939 PRIMA1Q86XR5 153 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 PTH2Q96A98 100 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 TMEM208Q9BTX3 173 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 CRYGDP07320 174 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 GTSCR1Q86UQ5 136 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 Q8N8P6 123 aa14.41□□□□□ -0.1
COPS7A-218ENST00000543939 A0A096LNJ9 63 aa14.4□□□□□ -0.1
COPS7A-218ENST00000543939 M0R2P5 195 aa14.4□□□□□ -0.1
COPS7A-218ENST00000543939 LEPROTL1O95214 131 aa14.4□□□□□ -0.1
COPS7A-218ENST00000543939 PIK3CD-AS1Q5SR53 167 aa14.4□□□□□ -0.1
COPS7A-218ENST00000543939 Q8N976 141 aa14.4□□□□□ -0.1
COPS7A-218ENST00000543939 AZU1P20160 251 aa14.39□□□□□ -0.11
COPS7A-218ENST00000543939 SPXQ9BT56 116 aa14.39□□□□□ -0.11
COPS7A-218ENST00000543939 C1QTNF4Q9BXJ3 329 aa14.39□□□□□ -0.11
COPS7A-218ENST00000543939 IGHV3OR16-12A0A075B7B8 117 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 SUMO4Q6EEV6 95 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 LINC00173Q6ZV60 143 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 RPL39LQ96EH5 51 aaKnown RBP14.38□□□□□ -0.11
COPS7A-218ENST00000543939 C20orf78Q9BR46 151 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 NOTCH3Q9UM47 2321 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 WIPF1O43516 503 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 PPP1R17O96001 155 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 IGLL1P15814 213 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 CSNK1G2-AS1Q8NCQ2 148 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 GOLT1BQ9Y3E0 138 aa14.38□□□□□ -0.11
COPS7A-218ENST00000543939 FAM74A4Q5TZK3 123 aa14.37□□□□□ -0.11
COPS7A-218ENST00000543939 F5H697 171 aa14.36□□□□□ -0.11
COPS7A-218ENST00000543939 BTF3P20290 206 aaKnown RBP14.36□□□□□ -0.11
COPS7A-218ENST00000543939 SUMO2P61956 95 aaKnown RBP14.36□□□□□ -0.11
COPS7A-218ENST00000543939 IL17DQ8TAD2 202 aa14.36□□□□□ -0.11
COPS7A-218ENST00000543939 SMIM2Q9BVW6 85 aa14.36□□□□□ -0.11
COPS7A-218ENST00000543939 HSPB8Q9UJY1 196 aa14.36□□□□□ -0.11
COPS7A-218ENST00000543939 NACAE9PAV3 2078 aa14.36□□□□□ -0.11
COPS7A-218ENST00000543939 HBDP02042 147 aa14.35□□□□□ -0.11
COPS7A-218ENST00000543939 RNASE8Q8TDE3 154 aaKnown RBP14.35□□□□□ -0.11
COPS7A-218ENST00000543939 TMEM70Q9BUB7 260 aa14.35□□□□□ -0.11
COPS7A-218ENST00000543939 PCP4L1A6NKN8 68 aa14.34□□□□□ -0.11
COPS7A-218ENST00000543939 A8MWV9 139 aa14.34□□□□□ -0.11
COPS7A-218ENST00000543939 S100A12P80511 92 aa14.34□□□□□ -0.11
COPS7A-218ENST00000543939 ZNF56Q15929 161 aa14.34□□□□□ -0.11
COPS7A-218ENST00000543939 C3orf56Q8N813 242 aa14.34□□□□□ -0.11
COPS7A-218ENST00000543939 TMEM263Q8WUH6 116 aaKnown RBP14.34□□□□□ -0.11
COPS7A-218ENST00000543939 FCER1GP30273 86 aa14.33□□□□□ -0.12
COPS7A-218ENST00000543939 UFSP1Q6NVU6 142 aa14.33□□□□□ -0.12
COPS7A-218ENST00000543939 SHISA2Q6UWI4 295 aa14.33□□□□□ -0.12
COPS7A-218ENST00000543939 ZNF705AQ6ZN79 300 aaPredicted RBP14.33□□□□□ -0.12
COPS7A-218ENST00000543939 TEX43Q6ZNM6 134 aa14.33□□□□□ -0.12
COPS7A-218ENST00000543939 CSTL1Q9H114 145 aa14.33□□□□□ -0.12
COPS7A-218ENST00000543939 M0QY20 66 aa14.32□□□□□ -0.12
COPS7A-218ENST00000543939 MRPL16Q9NX20 251 aaKnown RBP14.32□□□□□ -0.12
COPS7A-218ENST00000543939 SYS1-DBNDD2H3BUS1 97 aa14.32□□□□□ -0.12
COPS7A-218ENST00000543939 RPL32P62910 135 aaKnown RBP14.32□□□□□ -0.12
COPS7A-218ENST00000543939 SPATA12Q7Z6I5 190 aa14.32□□□□□ -0.12
COPS7A-218ENST00000543939 NDUFAF3Q9BU61 184 aa14.32□□□□□ -0.12
COPS7A-218ENST00000543939 TRBV6-5A0A0K0K1A5 114 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 TCAPO15273 167 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 LAGE3Q14657 143 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 C12orf54Q6X4T0 127 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 TMEM158Q8WZ71 300 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 MAP1LC3CQ9BXW4 147 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 ST20Q9HBF5 79 aa14.31□□□□□ -0.12
COPS7A-218ENST00000543939 FBN1P35555 2871 aaKnown RBP14.31□□□□□ -0.12
COPS7A-218ENST00000543939 CFAP126Q5VTH2 177 aa14.3□□□□□ -0.12
COPS7A-218ENST00000543939 EDA2RQ9HAV5 297 aa14.3□□□□□ -0.12
COPS7A-218ENST00000543939 POLR2KP53803 58 aaKnown RBP14.29□□□□□ -0.12
COPS7A-218ENST00000543939 K7EMI3 77 aa14.29□□□□□ -0.12
COPS7A-218ENST00000543939 RS1O15537 224 aa14.29□□□□□ -0.12
COPS7A-218ENST00000543939 ZNF664Q8N3J9 261 aa14.29□□□□□ -0.12
COPS7A-218ENST00000543939 C16orf74Q96GX8 76 aa14.29□□□□□ -0.12
COPS7A-218ENST00000543939 PLAC8L1A1L4L8 177 aa14.28□□□□□ -0.12
COPS7A-218ENST00000543939 PET117Q6UWS5 81 aa14.28□□□□□ -0.12
COPS7A-218ENST00000543939 IGHV3-73A0A0B4J1V6 119 aa14.27□□□□□ -0.12
COPS7A-218ENST00000543939 RHODO00212 210 aa14.27□□□□□ -0.12
COPS7A-218ENST00000543939 DAZ2Q13117 558 aaKnown RBP14.27□□□□□ -0.12
COPS7A-218ENST00000543939 RRN3P1Q2M238 152 aa14.27□□□□□ -0.13
COPS7A-218ENST00000543939 ORMDL2Q53FV1 153 aa14.27□□□□□ -0.13
COPS7A-218ENST00000543939 TRRAPQ9Y4A5 3859 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 TRGV1A0A0A0MS02 117 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 SDHAF1A6NFY7 115 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 H7C1H1 209 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 PKIAP61925 76 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 LGALS9BQ3B8N2 356 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 IFI27L1Q96BM0 104 aa14.26□□□□□ -0.13
COPS7A-218ENST00000543939 VCYO14598 125 aa14.25□□□□□ -0.13
COPS7A-218ENST00000543939 NEGR1Q7Z3B1 354 aa14.25□□□□□ -0.13
COPS7A-218ENST00000543939 PRO1933Q9H354 126 aa14.25□□□□□ -0.13
COPS7A-218ENST00000543939 KIR2DL5BA0A0G2JN68 375 aa14.24□□□□□ -0.13
COPS7A-218ENST00000543939 KIR2DL5BA0A0G2JPC4 375 aa14.24□□□□□ -0.13
COPS7A-218ENST00000543939 TRBV27A0A0K0K1C4 114 aa14.24□□□□□ -0.13
COPS7A-218ENST00000543939 C20orf202A1L168 122 aa14.24□□□□□ -0.13
COPS7A-218ENST00000543939 ZFP2Q6ZN57 461 aa14.24□□□□□ -0.13
COPS7A-218ENST00000543939 Q6ZTI0 123 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms