RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 M0R381 172 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 TOMM6Q96B49 74 aa12.85□□□□□ -0.35
SPIDR-227ENST00000541342 H7C1H1 209 aa12.84□□□□□ -0.35
SPIDR-227ENST00000541342 ELANEP08246 267 aa12.84□□□□□ -0.35
SPIDR-227ENST00000541342 SUMO2P61956 95 aaKnown RBP12.84□□□□□ -0.35
SPIDR-227ENST00000541342 NEXN-AS1Q8NBZ9 246 aa12.84□□□□□ -0.35
SPIDR-227ENST00000541342 TAL2Q16559 108 aa12.84□□□□□ -0.35
SPIDR-227ENST00000541342 FOXI2Q6ZQN5 318 aa12.84□□□□□ -0.35
SPIDR-227ENST00000541342 RNF152Q8N8N0 203 aa12.84□□□□□ -0.35
SPIDR-227ENST00000541342 FASNP49327 2511 aaKnown RBP12.84□□□□□ -0.35
SPIDR-227ENST00000541342 HECTD1Q9ULT8 2610 aa12.83□□□□□ -0.36
SPIDR-227ENST00000541342 MYO9AB2RTY4 2548 aa12.83□□□□□ -0.36
SPIDR-227ENST00000541342 TMEM238C9JI98 176 aa12.83□□□□□ -0.36
SPIDR-227ENST00000541342 RPL24P83731 157 aaKnown RBP12.83□□□□□ -0.36
SPIDR-227ENST00000541342 LENEPQ9Y5L5 61 aa12.83□□□□□ -0.36
SPIDR-227ENST00000541342 K7EMT4 169 aa12.83□□□□□ -0.36
SPIDR-227ENST00000541342 WFDC2Q14508 124 aa12.83□□□□□ -0.36
SPIDR-227ENST00000541342 C14orf178Q8N769 122 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-227ENST00000541342 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
SPIDR-227ENST00000541342 ZNF479Q96JC4 524 aa12.82□□□□□ -0.36
SPIDR-227ENST00000541342 SCGB3A1Q96QR1 104 aa12.82□□□□□ -0.36
SPIDR-227ENST00000541342 HIST1H4GQ99525 98 aa12.82□□□□□ -0.36
SPIDR-227ENST00000541342 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
SPIDR-227ENST00000541342 IGKV3-7A0A075B6H7 116 aa12.82□□□□□ -0.36
SPIDR-227ENST00000541342 RPL11P62913 178 aaKnown RBP12.82□□□□□ -0.36
SPIDR-227ENST00000541342 FAM19A4Q96LR4 140 aa12.82□□□□□ -0.36
SPIDR-227ENST00000541342 UBE2E2Q96LR5 201 aa12.82□□□□□ -0.36
SPIDR-227ENST00000541342 IGHV4OR15-8A0A075B7B6 117 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 A0A087WW49 117 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 DNAJC9-AS1A6NH13 148 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 C18orf65Q6ZTR6 163 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 TMEM86BQ8N661 226 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 SPANXB1Q9NS25 103 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-227ENST00000541342 MYMXA0A1B0GTQ4 84 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 A0A1B0GWB2 263 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 H3BMG7 143 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 ANXA2RQ3ZCQ2 193 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 ORMDL2Q53FV1 153 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 TEX29Q8N6K0 151 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 BAALCQ8WXS3 180 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 ESM1Q9NQ30 184 aa12.81□□□□□ -0.36
SPIDR-227ENST00000541342 F6UB75 175 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 SRD5A1P18405 259 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 C20orf78Q9BR46 151 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 LINC00477Q96M19 166 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 DPH3P1Q9H4G8 78 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 YAE1D1Q9NRH1 226 aa12.8□□□□□ -0.36
SPIDR-227ENST00000541342 LINC01619G3V211 115 aa12.79□□□□□ -0.36
SPIDR-227ENST00000541342 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
SPIDR-227ENST00000541342 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
SPIDR-227ENST00000541342 GNRH2O43555 120 aa12.79□□□□□ -0.36
SPIDR-227ENST00000541342 C2orf66Q6UXQ4 117 aa12.79□□□□□ -0.36
SPIDR-227ENST00000541342 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 SYNJ2BPP57105 145 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 RRN3P1Q2M238 152 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 OR11H1Q8NG94 326 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 TCTEX1D4Q5JR98 221 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
SPIDR-227ENST00000541342 Q6ZSV7 163 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 PRO0461Q9UI25 63 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 PHLDA3Q9Y5J5 127 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 F8W1H4 67 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 HOXD3P31249 432 aaPredicted RBP12.78□□□□□ -0.36
SPIDR-227ENST00000541342 ASIPP42127 132 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 MTURNQ8N3F0 131 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 OR10J6PQ8NGY7 276 aa12.78□□□□□ -0.36
SPIDR-227ENST00000541342 HIST2H2BDQ6DRA6 164 aa12.77□□□□□ -0.36
SPIDR-227ENST00000541342 APRG1Q8IVJ8 170 aa12.77□□□□□ -0.36
SPIDR-227ENST00000541342 PRSS29PA6NIE9 313 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
SPIDR-227ENST00000541342 RNASE4P34096 147 aaKnown RBP12.77□□□□□ -0.37
SPIDR-227ENST00000541342 DEFB136Q30KP8 78 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 SH2D6Q7Z4S9 175 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 CYSLTR1Q9Y271 337 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 CRYGDP07320 174 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 MGPP08493 103 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 LINC00315P59091 139 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.37
SPIDR-227ENST00000541342 OVOL1O14753 267 aa12.76□□□□□ -0.37
SPIDR-227ENST00000541342 DCANP1Q8TF63 244 aa12.76□□□□□ -0.37
SPIDR-227ENST00000541342 TSHBP01222 138 aa12.76□□□□□ -0.37
SPIDR-227ENST00000541342 POM121L12Q8N7R1 296 aa12.75□□□□□ -0.37
SPIDR-227ENST00000541342 KIF25-AS1Q9Y6Z4 181 aa12.75□□□□□ -0.37
SPIDR-227ENST00000541342 LGALS9O00182 355 aa12.75□□□□□ -0.37
SPIDR-227ENST00000541342 PLEKHB2Q96CS7 222 aa12.75□□□□□ -0.37
SPIDR-227ENST00000541342 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
SPIDR-227ENST00000541342 ETDBQ3ZM63 59 aa12.75□□□□□ -0.37
SPIDR-227ENST00000541342 DUSP14O95147 198 aaKnown RBP12.74□□□□□ -0.37
SPIDR-227ENST00000541342 MED14OSP0DP75 135 aa12.74□□□□□ -0.37
SPIDR-227ENST00000541342 NXPH4O95158 308 aa12.74□□□□□ -0.37
SPIDR-227ENST00000541342 DEFB104AQ8WTQ1 72 aa12.74□□□□□ -0.37
SPIDR-227ENST00000541342 SMR3AQ99954 134 aa12.74□□□□□ -0.37
SPIDR-227ENST00000541342 SLURP1P55000 103 aa12.73□□□□□ -0.37
SPIDR-227ENST00000541342 IGLV4-69A0A075B6H9 119 aa12.73□□□□□ -0.37
SPIDR-227ENST00000541342 TSSC4Q9Y5U2 329 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-227ENST00000541342 MTORP42345 2549 aa12.73□□□□□ -0.37
SPIDR-227ENST00000541342 SPAG8Q99932 426 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-227ENST00000541342 JPT2Q9H910 190 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms