RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 SCGB1D1O95968 90 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 KRTDAPP60985 99 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 Q6ZWC4 215 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 DEFB125Q8N687 156 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 SYT8Q8NBV8 401 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 MAP1LC3AQ9H492 121 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 NIT2Q9NQR4 276 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 C19orf73Q9NVV2 129 aa6.98□□□□□ -1.29
PAAF1-209ENST00000540659 A0A087WWL8 130 aa6.97□□□□□ -1.29
PAAF1-209ENST00000540659 PCP4L1A6NKN8 68 aa6.97□□□□□ -1.29
PAAF1-209ENST00000540659 PPBPP02775 128 aa6.97□□□□□ -1.29
PAAF1-209ENST00000540659 IGLL1P15814 213 aa6.97□□□□□ -1.29
PAAF1-209ENST00000540659 ZNF415Q09FC8 603 aa6.97□□□□□ -1.29
PAAF1-209ENST00000540659 JOSD1Q15040 202 aaPredicted RBP6.97□□□□□ -1.29
PAAF1-209ENST00000540659 FAM74A4Q5TZK3 123 aa6.97□□□□□ -1.29
PAAF1-209ENST00000540659 F5H697 171 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 WIPF1O43516 503 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 NXPH4O95158 308 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 C1orf158Q8N1D5 194 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 MRAP2Q96G30 205 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 GSN-AS1Q9NRJ2 163 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 MUC4Q99102 2169 aa6.96□□□□□ -1.3
PAAF1-209ENST00000540659 AZU1P20160 251 aa6.95□□□□□ -1.3
PAAF1-209ENST00000540659 ZNF56Q15929 161 aa6.95□□□□□ -1.3
PAAF1-209ENST00000540659 ZNF876PQ49A33 203 aa6.95□□□□□ -1.3
PAAF1-209ENST00000540659 NRACQ8N912 160 aa6.95□□□□□ -1.3
PAAF1-209ENST00000540659 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
PAAF1-209ENST00000540659 AP5S1Q9NUS5 200 aa6.95□□□□□ -1.3
PAAF1-209ENST00000540659 IGHV3-73A0A0B4J1V6 119 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 C3orf79P0CE67 100 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 SUMO4Q6EEV6 95 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 LINC00173Q6ZV60 143 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 LINC00467Q9BRT7 94 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 NDUFAF3Q9BU61 184 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 MRPL16Q9NX20 251 aaKnown RBP6.94□□□□□ -1.3
PAAF1-209ENST00000540659 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 KIF25-AS1Q9Y6Z4 181 aa6.94□□□□□ -1.3
PAAF1-209ENST00000540659 H0Y8G0 127 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 M0R2P5 195 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 TCAPO15273 167 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 APOC4P55056 127 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 Q8N8P6 123 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 C11orf72Q8NBR9 251 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 RASL10AQ92737 203 aa6.93□□□□□ -1.3
PAAF1-209ENST00000540659 CRYGDP07320 174 aa6.92□□□□□ -1.3
PAAF1-209ENST00000540659 GIG44P09565 113 aaPredicted RBP6.92□□□□□ -1.3
PAAF1-209ENST00000540659 LINC00315P59091 139 aa6.92□□□□□ -1.3
PAAF1-209ENST00000540659 DEFB104AQ8WTQ1 72 aa6.92□□□□□ -1.3
PAAF1-209ENST00000540659 NXT2Q9NPJ8 142 aaKnown RBP6.92□□□□□ -1.3
PAAF1-209ENST00000540659 NOTCH1P46531 2555 aa6.92□□□□□ -1.3
PAAF1-209ENST00000540659 A0A096LNJ9 63 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 KIR2DL5BA0A0G2JN68 375 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 KIR2DL5BA0A0G2JPC4 375 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 PPP1R17O96001 155 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 HBDP02042 147 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 BTF3P20290 206 aaKnown RBP6.91□□□□□ -1.3
PAAF1-209ENST00000540659 S100A12P80511 92 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 PIK3CD-AS1Q5SR53 167 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 NEGR1Q7Z3B1 354 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 SPATA12Q7Z6I5 190 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 KIR2DL5AQ8N109 375 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 POM121L12Q8N7R1 296 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 KIR2DL5BQ8NHK3 375 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 SPXQ9BT56 116 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 HSPB8Q9UJY1 196 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 MEGF8Q7Z7M0 2845 aa6.91□□□□□ -1.3
PAAF1-209ENST00000540659 IGLV2-18A0A075B6J9 118 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 TRGV1A0A0A0MS02 117 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 SMIM9A6NGZ8 99 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 PRSS47A8MTI9 375 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 CIDEAO60543 219 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 SUMO2P61956 95 aaKnown RBP6.9□□□□□ -1.3
PAAF1-209ENST00000540659 Q8N976 141 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
PAAF1-209ENST00000540659 C18orf15Q96N68 181 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 TMEM70Q9BUB7 260 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 SMIM2Q9BVW6 85 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 MAP1LC3CQ9BXW4 147 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 CSTL1Q9H114 145 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 PRO1933Q9H354 126 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 ST20Q9HBF5 79 aa6.9□□□□□ -1.3
PAAF1-209ENST00000540659 DNAH3Q8TD57 4116 aa6.9□□□□□ -1.31
PAAF1-209ENST00000540659 NOTCH3Q9UM47 2321 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 A8MWV9 139 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 LAGE3Q14657 143 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 RRN3P1Q2M238 152 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 OXLD1Q5BKU9 147 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 ATOH7Q8N100 152 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 CSNK1G2-AS1Q8NCQ2 148 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 IL17DQ8TAD2 202 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 RNASE8Q8TDE3 154 aaKnown RBP6.89□□□□□ -1.31
PAAF1-209ENST00000540659 C16orf74Q96GX8 76 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 C20orf78Q9BR46 151 aa6.89□□□□□ -1.31
PAAF1-209ENST00000540659 LINC01546A6NGU7 62 aa6.88□□□□□ -1.31
PAAF1-209ENST00000540659 SYS1-DBNDD2H3BUS1 97 aa6.88□□□□□ -1.31
PAAF1-209ENST00000540659 RS1O15537 224 aa6.88□□□□□ -1.31
PAAF1-209ENST00000540659 NUDT3O95989 172 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms