RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 A0A087WWL8 130 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 A0A096LNJ9 63 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 SMIM17P0DL12 118 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 SYT8Q8NBV8 401 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 SPATA3Q8NHX4 192 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 LINC00315P59091 139 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 SPATA12Q7Z6I5 190 aa16.42■□□□□ 0.22
HOMER3-204ENST00000539827 RASL10AQ92737 203 aa16.41■□□□□ 0.22
HOMER3-204ENST00000539827 RPL39LQ96EH5 51 aaKnown RBP16.41■□□□□ 0.22
HOMER3-204ENST00000539827 NXT2Q9NPJ8 142 aaKnown RBP16.41■□□□□ 0.22
HOMER3-204ENST00000539827 C19orf73Q9NVV2 129 aa16.41■□□□□ 0.22
HOMER3-204ENST00000539827 Q8N8P6 123 aa16.4■□□□□ 0.22
HOMER3-204ENST00000539827 TMEM70Q9BUB7 260 aa16.4■□□□□ 0.22
HOMER3-204ENST00000539827 ZMAT5Q9UDW3 170 aaKnown RBP16.4■□□□□ 0.22
HOMER3-204ENST00000539827 HSPB8Q9UJY1 196 aa16.4■□□□□ 0.22
HOMER3-204ENST00000539827 IGLV2-18A0A075B6J9 118 aa16.39■□□□□ 0.21
HOMER3-204ENST00000539827 M0R143 59 aa16.39■□□□□ 0.21
HOMER3-204ENST00000539827 POM121L12Q8N7R1 296 aa16.39■□□□□ 0.21
HOMER3-204ENST00000539827 CITED1Q99966 193 aa16.39■□□□□ 0.21
HOMER3-204ENST00000539827 ZNF876PQ49A33 203 aa16.38■□□□□ 0.21
HOMER3-204ENST00000539827 NIPBLQ6KC79 2804 aaeCLIP16.38■□□□□ 0.21
HOMER3-204ENST00000539827 LINC01546A6NGU7 62 aa16.38■□□□□ 0.21
HOMER3-204ENST00000539827 PRSS47A8MTI9 375 aa16.38■□□□□ 0.21
HOMER3-204ENST00000539827 FAM74A4Q5TZK3 123 aa16.38■□□□□ 0.21
HOMER3-204ENST00000539827 SYS1-DBNDD2H3BUS1 97 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 HBDP02042 147 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 SPATA45Q537H7 98 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 ZNF705AQ6ZN79 300 aaPredicted RBP16.37■□□□□ 0.21
HOMER3-204ENST00000539827 IGHV3OR16-12A0A075B7B8 117 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 C20orf202A1L168 122 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 F5H697 171 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 RPL35AP18077 110 aaKnown RBP16.37■□□□□ 0.21
HOMER3-204ENST00000539827 ATOH7Q8N100 152 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 C1orf158Q8N1D5 194 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 FAM110AQ9BQ89 295 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 TMEM208Q9BTX3 173 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 ZNF747Q9BV97 191 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 MAP1LC3CQ9BXW4 147 aa16.37■□□□□ 0.21
HOMER3-204ENST00000539827 H0Y8G0 127 aa16.36■□□□□ 0.21
HOMER3-204ENST00000539827 ZNF415Q09FC8 603 aa16.36■□□□□ 0.21
HOMER3-204ENST00000539827 SUMO4Q6EEV6 95 aa16.36■□□□□ 0.21
HOMER3-204ENST00000539827 LINC00467Q9BRT7 94 aa16.36■□□□□ 0.21
HOMER3-204ENST00000539827 EREGO14944 169 aa16.35■□□□□ 0.21
HOMER3-204ENST00000539827 TCAPO15273 167 aa16.35■□□□□ 0.21
HOMER3-204ENST00000539827 CRYGDP07320 174 aa16.35■□□□□ 0.21
HOMER3-204ENST00000539827 NUTF2P61970 127 aaKnown RBP16.35■□□□□ 0.21
HOMER3-204ENST00000539827 DEFB125Q8N687 156 aa16.35■□□□□ 0.21
HOMER3-204ENST00000539827 MCRIP2Q9BUT9 160 aaKnown RBP16.35■□□□□ 0.21
HOMER3-204ENST00000539827 SMIM2Q9BVW6 85 aa16.35■□□□□ 0.21
HOMER3-204ENST00000539827 SUMO2P61956 95 aaKnown RBP16.34■□□□□ 0.21
HOMER3-204ENST00000539827 SNHG12Q9BXW3 62 aa16.34■□□□□ 0.21
HOMER3-204ENST00000539827 A0A1B0GV90 55 aa16.33■□□□□ 0.21
HOMER3-204ENST00000539827 AZU1P20160 251 aa16.33■□□□□ 0.21
HOMER3-204ENST00000539827 UQCR10Q9UDW1 63 aa16.33■□□□□ 0.21
HOMER3-204ENST00000539827 FCER1GP30273 86 aa16.33■□□□□ 0.2
HOMER3-204ENST00000539827 ZNF56Q15929 161 aa16.33■□□□□ 0.2
HOMER3-204ENST00000539827 C11orf72Q8NBR9 251 aa16.33■□□□□ 0.2
HOMER3-204ENST00000539827 TMEM158Q8WZ71 300 aa16.33■□□□□ 0.2
HOMER3-204ENST00000539827 C20orf78Q9BR46 151 aa16.33■□□□□ 0.2
HOMER3-204ENST00000539827 GIG44P09565 113 aaPredicted RBP16.32■□□□□ 0.2
HOMER3-204ENST00000539827 C9orf66Q5T8R8 295 aa16.32■□□□□ 0.2
HOMER3-204ENST00000539827 M0R2P5 195 aa16.31■□□□□ 0.2
HOMER3-204ENST00000539827 PET117Q6UWS5 81 aa16.31■□□□□ 0.2
HOMER3-204ENST00000539827 LINC00469Q8N7U9 141 aa16.31■□□□□ 0.2
HOMER3-204ENST00000539827 LAGE3Q14657 143 aa16.31■□□□□ 0.2
HOMER3-204ENST00000539827 TRAV9-2A0A087WT02 112 aa16.3■□□□□ 0.2
HOMER3-204ENST00000539827 PPP1R17O96001 155 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 MAJINQ3KP22 176 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 C18orf15Q96N68 181 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 IGLC3P0DOY3 106 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 INSL3P51460 131 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 NEGR1Q7Z3B1 354 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 PMCHL2Q9BQD1 86 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 CSTL1Q9H114 145 aa16.29■□□□□ 0.2
HOMER3-204ENST00000539827 IGHV3-73A0A0B4J1V6 119 aa16.28■□□□□ 0.2
HOMER3-204ENST00000539827 ST20Q9HBF5 79 aa16.28■□□□□ 0.2
HOMER3-204ENST00000539827 MRPL16Q9NX20 251 aaKnown RBP16.28■□□□□ 0.2
HOMER3-204ENST00000539827 IFI27L1Q96BM0 104 aa16.27■□□□□ 0.2
HOMER3-204ENST00000539827 SPXQ9BT56 116 aa16.27■□□□□ 0.2
HOMER3-204ENST00000539827 JMJD1CQ15652 2540 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 KRTAP24-1Q3LI83 254 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 MORN3Q6PF18 240 aaPredicted RBP16.26■□□□□ 0.19
HOMER3-204ENST00000539827 M0QY20 66 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 NUDT3O95989 172 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 LINC01545Q5VT33 79 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 PTH2Q96A98 100 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 GOLT1BQ9Y3E0 138 aa16.26■□□□□ 0.19
HOMER3-204ENST00000539827 GTSCR1Q86UQ5 136 aa16.25■□□□□ 0.19
HOMER3-204ENST00000539827 DEFB104AQ8WTQ1 72 aa16.25■□□□□ 0.19
HOMER3-204ENST00000539827 A8MWV9 139 aa16.24■□□□□ 0.19
HOMER3-204ENST00000539827 HNRNPA3P51991 378 aaKnown RBP16.24■□□□□ 0.19
HOMER3-204ENST00000539827 POLR2KP53803 58 aaKnown RBP16.24■□□□□ 0.19
HOMER3-204ENST00000539827 ORMDL2Q53FV1 153 aa16.23■□□□□ 0.19
HOMER3-204ENST00000539827 TENM1Q9UKZ4 2725 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 CFAP126Q5VTH2 177 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 Q6ZN92 141 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 RNASE8Q8TDE3 154 aaKnown RBP16.22■□□□□ 0.19
HOMER3-204ENST00000539827 C1QTNF4Q9BXJ3 329 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 SDHAF1A6NFY7 115 aa16.22■□□□□ 0.19
HOMER3-204ENST00000539827 IGLL1P15814 213 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms