RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 PMCHL2Q9BQD1 86 aa7.53□□□□□ -1.2
SPARC-209ENST00000539687 SELENOKQ9Y6D0 94 aa7.53□□□□□ -1.2
SPARC-209ENST00000539687 IGLV2-18A0A075B6J9 118 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 TRAV12-2A0A075B6T6 113 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 A0A096LNJ9 63 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 A0A1W2PRX2 142 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 M0R143 59 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 IGLC3P0DOY3 106 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 KIR3DS1Q14943 382 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 Q6ZQT7 251 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 STHQ8IWL8 128 aa7.52□□□□□ -1.21
SPARC-209ENST00000539687 ZNF256Q9Y2P7 627 aaPredicted RBP7.52□□□□□ -1.21
SPARC-209ENST00000539687 TRBV6-5A0A0K0K1A5 114 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 A8MWV9 139 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 NUDT3O95989 172 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 LORP23490 312 aaPredicted RBP7.51□□□□□ -1.21
SPARC-209ENST00000539687 HNRNPA3P51991 378 aaKnown RBP7.51□□□□□ -1.21
SPARC-209ENST00000539687 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
SPARC-209ENST00000539687 SPXQ9BT56 116 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 EDA2RQ9HAV5 297 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 GOLT1BQ9Y3E0 138 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 KIF25-AS1Q9Y6Z4 181 aa7.51□□□□□ -1.21
SPARC-209ENST00000539687 M0R2P5 195 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 RHODO00212 210 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 VCYO14598 125 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 LINC00173Q6ZV60 143 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 TMEM158Q8WZ71 300 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 RASL10AQ92737 203 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 C2orf88Q9BSF0 95 aa7.5□□□□□ -1.21
SPARC-209ENST00000539687 MRPS16Q9Y3D3 137 aaKnown RBP7.5□□□□□ -1.21
SPARC-209ENST00000539687 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 F5H697 171 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 SAP30O75446 220 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 IGLV1-51P01701 117 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 IGLL1P15814 213 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 GATA1P15976 413 aaPredicted RBP7.49□□□□□ -1.21
SPARC-209ENST00000539687 ZNF876PQ49A33 203 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 MORN3Q6PF18 240 aaPredicted RBP7.49□□□□□ -1.21
SPARC-209ENST00000539687 Q6ZN92 141 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 ATOH7Q8N100 152 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 C11orf44Q8N8P7 122 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 C1QTNF4Q9BXJ3 329 aa7.49□□□□□ -1.21
SPARC-209ENST00000539687 TRAV12-1A0A0B4J245 112 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 H0Y8G0 127 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.48□□□□□ -1.21
SPARC-209ENST00000539687 PF4P02776 101 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 PRSS1P07477 247 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 INSL3P51460 131 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 LINC00315P59091 139 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 ZNF56Q15929 161 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 ODF3L2Q3SX64 289 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 SUMO4Q6EEV6 95 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 SLC25A34Q6PIV7 304 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 TOMM6Q96B49 74 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 LINC01587Q99440 93 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 MDFIQ99750 246 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 MDFICQ9P1T7 246 aa7.48□□□□□ -1.21
SPARC-209ENST00000539687 RBMY1BA6NDE4 496 aaKnown RBP7.47□□□□□ -1.21
SPARC-209ENST00000539687 RBMY1EA6NEQ0 496 aaKnown RBP7.47□□□□□ -1.21
SPARC-209ENST00000539687 GAS8-AS1O95177 125 aa7.47□□□□□ -1.21
SPARC-209ENST00000539687 RBMY1DP0C7P1 496 aaKnown RBP7.47□□□□□ -1.21
SPARC-209ENST00000539687 PLNP26678 52 aa7.47□□□□□ -1.21
SPARC-209ENST00000539687 RHOHQ15669 191 aa7.47□□□□□ -1.21
SPARC-209ENST00000539687 TMEM208Q9BTX3 173 aa7.47□□□□□ -1.21
SPARC-209ENST00000539687 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
SPARC-209ENST00000539687 CYSLTR1Q9Y271 337 aa7.47□□□□□ -1.21
SPARC-209ENST00000539687 ZNF469Q96JG9 3925 aaPredicted RBP7.47□□□□□ -1.21
SPARC-209ENST00000539687 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 ADARB2-AS1A8MUL3 147 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 CRLF1O75462 422 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 DPM2O94777 84 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 CRYGDP07320 174 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 FXYD7P58549 80 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 BEAN1Q3B7T3 259 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 NSUN5P1Q3KNT7 163 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 PAPPA-AS1Q5QFB9 102 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 FAM74A4Q5TZK3 123 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 RPL39LQ96EH5 51 aaKnown RBP7.46□□□□□ -1.22
SPARC-209ENST00000539687 TMEM141Q96I45 108 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 SCGB3A1Q96QR1 104 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 SMR3AQ99954 134 aa7.46□□□□□ -1.22
SPARC-209ENST00000539687 A0A087WWL8 130 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 A0A087WX48 190 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 hDV102S1A0JD36 115 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 M0QY20 66 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 DLEU1O43261 78 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 CIDEAO60543 219 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 IGKCP01834 107 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 COX8AP10176 69 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 POLR2KP53803 58 aaKnown RBP7.45□□□□□ -1.22
SPARC-209ENST00000539687 ERASQ7Z444 233 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 DNAJC30Q96LL9 226 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 C18orf15Q96N68 181 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 ZMAT4Q9H898 229 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 VPS13CQ709C8 3753 aa7.45□□□□□ -1.22
SPARC-209ENST00000539687 SDHAF1A6NFY7 115 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 INAFM1C9JVW0 142 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 I3L3M4 83 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms