RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 DCANP1Q8TF63 244 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 ORAOV1Q8WV07 137 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
UBE3B-208ENST00000538070 H3BUA1 57 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 DUSP14O95147 198 aaKnown RBP6.51□□□□□ -1.37
UBE3B-208ENST00000538070 GATA3P23771 443 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 ZNF876PQ49A33 203 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 OPRPNQ99935 248 aaPredicted RBP6.51□□□□□ -1.37
UBE3B-208ENST00000538070 CHTOPQ9Y3Y2 248 aaKnown RBP6.51□□□□□ -1.37
UBE3B-208ENST00000538070 DEFB113Q30KQ7 82 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 SCGB1D4Q6XE38 83 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 UBE2E2Q96LR5 201 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 HIST1H4GQ99525 98 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 TP53TG1Q9Y2A0 90 aa6.51□□□□□ -1.37
UBE3B-208ENST00000538070 IGHV3-16A0A0C4DH30 117 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 P0DMU3 169 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 FAM231AP0DMU4 169 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 FAM231CP0DMU5 169 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 TMEM170BQ5T4T1 132 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 SUMO4Q6EEV6 95 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 ZNF469Q96JG9 3925 aaPredicted RBP6.5□□□□□ -1.37
UBE3B-208ENST00000538070 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
UBE3B-208ENST00000538070 A6NDN8 102 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 CRIP2P52943 208 aaPredicted RBP6.5□□□□□ -1.37
UBE3B-208ENST00000538070 RNASE13Q5GAN3 156 aaKnown RBP6.5□□□□□ -1.37
UBE3B-208ENST00000538070 DEFB125Q8N687 156 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 MAPKAPK5-AS1Q8N8E1 139 aa6.5□□□□□ -1.37
UBE3B-208ENST00000538070 SDHAF1A6NFY7 115 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 LGALS1P09382 135 aaKnown RBP6.49□□□□□ -1.37
UBE3B-208ENST00000538070 CDKN1BP46527 198 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 FXYD2P54710 66 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 SRSF2Q01130 221 aaKnown RBP6.49□□□□□ -1.37
UBE3B-208ENST00000538070 MRAP2Q96G30 205 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 KIR2DL4Q99706 377 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 ZNF702PQ9H963 129 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 CYSLTR1Q9Y271 337 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 BAHCC1Q9P281 2608 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 FGF6P10767 208 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 PROK1P58294 105 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 BOD1L2Q8IYS8 172 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 MTURNQ8N3F0 131 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 RNASE8Q8TDE3 154 aaKnown RBP6.49□□□□□ -1.37
UBE3B-208ENST00000538070 CHAC1Q9BUX1 264 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 LENEPQ9Y5L5 61 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 IGLV2-18A0A075B6J9 118 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 A0A0J9YX75 114 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 OR11H12B2RN74 326 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 J3QKU1 62 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 CIDEAO60543 219 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 ORMDL2Q53FV1 153 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 TMEM61Q8N0U2 210 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 OR11H2Q8NH07 326 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 XCL2Q9UBD3 114 aa6.49□□□□□ -1.37
UBE3B-208ENST00000538070 SETXQ7Z333 2677 aaKnown RBP6.49□□□□□ -1.37
UBE3B-208ENST00000538070 TRBV25-1A0A075B6N4 114 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 CFHR3Q02985 330 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 LINC01587Q99440 93 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 UNC79Q9P2D8 2635 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 IGHV1OR15-1A0A075B7D0 117 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 GAGE1Q13065 139 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 Q6YL49 198 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 OR1N2Q8NGR9 330 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 DLX4Q92988 240 aaPredicted RBP6.48□□□□□ -1.37
UBE3B-208ENST00000538070 PSMG3-AS1Q96PY0 264 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 YAE1D1Q9NRH1 226 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 HHLA3Q9XRX5 114 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 IGHV3-38A0A0C4DH36 116 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 HSD52Q0P140 79 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
UBE3B-208ENST00000538070 CITED1Q99966 193 aa6.48□□□□□ -1.37
UBE3B-208ENST00000538070 A0A087WX48 190 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 H7C1H1 209 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 K7EQG2 157 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 K7EMT4 169 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 IGHV3-53P01767 116 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 SYT8Q8NBV8 401 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 PHLDA1Q8WV24 401 aaPredicted RBP6.47□□□□□ -1.37
UBE3B-208ENST00000538070 VPS25Q9BRG1 176 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 OR9G4Q8NGQ1 327 aa6.47□□□□□ -1.37
UBE3B-208ENST00000538070 J3QLI3 93 aa6.46□□□□□ -1.37
UBE3B-208ENST00000538070 ELANEP08246 267 aa6.46□□□□□ -1.37
UBE3B-208ENST00000538070 SMIM13P0DJ93 91 aa6.46□□□□□ -1.37
UBE3B-208ENST00000538070 KLK9Q2XQG4 91 aa6.46□□□□□ -1.37
UBE3B-208ENST00000538070 BAALCQ8WXS3 180 aa6.46□□□□□ -1.37
UBE3B-208ENST00000538070 ZNF815PA8K554 130 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 KLLNB2CW77 178 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 F8VRH5 84 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 CEMP1Q6PRD7 247 aaPredicted RBP6.46□□□□□ -1.38
UBE3B-208ENST00000538070 ATP6V0BQ99437 205 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 LINC01619G3V211 115 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 RPL24P83731 157 aaKnown RBP6.46□□□□□ -1.38
UBE3B-208ENST00000538070 MRPL16Q9NX20 251 aaKnown RBP6.46□□□□□ -1.38
UBE3B-208ENST00000538070 Q9UF83 564 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 SPCS1Q9Y6A9 102 aa6.46□□□□□ -1.38
UBE3B-208ENST00000538070 A0A096LNT2 108 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 APOMO95445 188 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 SEC11AP67812 179 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms