RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MGPP08493 103 aa9.94□□□□□ -0.82
VPS33B-202ENST00000535906 OR11H1Q8NG94 326 aa9.94□□□□□ -0.82
VPS33B-202ENST00000535906 TRAV12-1A0A0B4J245 112 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 SPINK13Q1W4C9 94 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 AP1S3Q96PC3 154 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 LINC01619G3V211 115 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 PLNP26678 52 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 TOMM6Q96B49 74 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 TTTY13Q9BZ97 58 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 JPT2Q9H910 190 aa9.93□□□□□ -0.82
VPS33B-202ENST00000535906 ITPR2Q14571 2701 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 CDKN1BP46527 198 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 KHDC1LQ5JSQ8 128 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 POM121L12Q8N7R1 296 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 KIF25-AS1Q9Y6Z4 181 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 PPP1R17O96001 155 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 LINC00315P59091 139 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 RBX1P62877 108 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 Q6ZSV7 163 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 C4orf3Q8WVX3 66 aa9.92□□□□□ -0.82
VPS33B-202ENST00000535906 KMT2BQ9UMN6 2715 aaPredicted RBP9.91□□□□□ -0.82
VPS33B-202ENST00000535906 HELZ2Q9BYK8 2649 aaKnown RBP9.91□□□□□ -0.82
VPS33B-202ENST00000535906 TRBV25-1A0A075B6N4 114 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 H7C1H1 209 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 TMEM86BQ8N661 226 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 CHAC1Q9BUX1 264 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 MDFICQ9P1T7 246 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 DNAJC9-AS1A6NH13 148 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 F8VRH5 84 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 PLA2G2AP14555 144 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 FOXI2Q6ZQN5 318 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 Q8N1Y9 231 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 JMJD8Q96S16 334 aa9.91□□□□□ -0.82
VPS33B-202ENST00000535906 ACANP16112 2415 aa9.9□□□□□ -0.82
VPS33B-202ENST00000535906 IGHV3-16A0A0C4DH30 117 aa9.9□□□□□ -0.82
VPS33B-202ENST00000535906 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
VPS33B-202ENST00000535906 H3BUT2 72 aa9.9□□□□□ -0.82
VPS33B-202ENST00000535906 GTF2H5Q6ZYL4 71 aa9.9□□□□□ -0.82
VPS33B-202ENST00000535906 DLX4Q92988 240 aaPredicted RBP9.9□□□□□ -0.82
VPS33B-202ENST00000535906 DUSP14O95147 198 aaKnown RBP9.9□□□□□ -0.83
VPS33B-202ENST00000535906 GCSHP23434 173 aa9.9□□□□□ -0.83
VPS33B-202ENST00000535906 UFSP1Q6NVU6 142 aa9.9□□□□□ -0.83
VPS33B-202ENST00000535906 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.83
VPS33B-202ENST00000535906 KLHL30-AS1Q8NEE0 82 aa9.9□□□□□ -0.83
VPS33B-202ENST00000535906 CST9LQ9H4G1 147 aa9.9□□□□□ -0.83
VPS33B-202ENST00000535906 ESM1Q9NQ30 184 aa9.9□□□□□ -0.83
VPS33B-202ENST00000535906 A0A087WWL8 130 aa9.89□□□□□ -0.83
VPS33B-202ENST00000535906 KNCNA6PVL3 124 aa9.89□□□□□ -0.83
VPS33B-202ENST00000535906 RAB37Q96AX2 223 aa9.89□□□□□ -0.83
VPS33B-202ENST00000535906 C9orf85Q96MD7 179 aa9.89□□□□□ -0.83
VPS33B-202ENST00000535906 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 FXYD2P54710 66 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 DEFB131AP59861 70 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 KRTAP1-1Q07627 177 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 TMEM61Q8N0U2 210 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 PEMTQ9UBM1 199 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 CHTOPQ9Y3Y2 248 aaKnown RBP9.88□□□□□ -0.83
VPS33B-202ENST00000535906 IGHV1OR15-1A0A075B7D0 117 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 J3QKU1 62 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 CSTL1Q9H114 145 aa9.88□□□□□ -0.83
VPS33B-202ENST00000535906 K7EP34 96 aa9.87□□□□□ -0.83
VPS33B-202ENST00000535906 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
VPS33B-202ENST00000535906 TEX29Q8N6K0 151 aa9.87□□□□□ -0.83
VPS33B-202ENST00000535906 TM2D2Q9BX73 214 aa9.87□□□□□ -0.83
VPS33B-202ENST00000535906 RBMY1A1P0DJD3 496 aaKnown RBP9.87□□□□□ -0.83
VPS33B-202ENST00000535906 RBMY1CP0DJD4 496 aa9.87□□□□□ -0.83
VPS33B-202ENST00000535906 RBMY1FQ15415 496 aaKnown RBP9.87□□□□□ -0.83
VPS33B-202ENST00000535906 CEND1Q8N111 149 aa9.87□□□□□ -0.83
VPS33B-202ENST00000535906 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
VPS33B-202ENST00000535906 NAA38Q9BRA0 125 aaKnown RBP9.87□□□□□ -0.83
VPS33B-202ENST00000535906 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
VPS33B-202ENST00000535906 OCIAD2Q56VL3 154 aa9.86□□□□□ -0.83
VPS33B-202ENST00000535906 SUMO4Q6EEV6 95 aa9.86□□□□□ -0.83
VPS33B-202ENST00000535906 NEGR1Q7Z3B1 354 aa9.86□□□□□ -0.83
VPS33B-202ENST00000535906 C11orf44Q8N8P7 122 aa9.86□□□□□ -0.83
VPS33B-202ENST00000535906 H3BMM0 161 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 TAL2Q16559 108 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 FAM74A4Q5TZK3 123 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 F5H697 171 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 DEFB114Q30KQ6 69 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 WNK1Q9H4A3 2382 aa9.85□□□□□ -0.83
VPS33B-202ENST00000535906 UNC79Q9P2D8 2635 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 SETD2Q9BYW2 2564 aaPredicted RBP9.84□□□□□ -0.83
VPS33B-202ENST00000535906 RBMY1BA6NDE4 496 aaKnown RBP9.84□□□□□ -0.83
VPS33B-202ENST00000535906 RBMY1EA6NEQ0 496 aaKnown RBP9.84□□□□□ -0.83
VPS33B-202ENST00000535906 RBMY1DP0C7P1 496 aaKnown RBP9.84□□□□□ -0.83
VPS33B-202ENST00000535906 POLR2KP53803 58 aaKnown RBP9.84□□□□□ -0.83
VPS33B-202ENST00000535906 DYNLRB2Q8TF09 96 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 RAX2Q96IS3 184 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 MTORP42345 2549 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 TRAV2A0A0B4J234 112 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 A0A1W2PRX2 142 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 PRSS29PA6NIE9 313 aa9.84□□□□□ -0.83
VPS33B-202ENST00000535906 LINC01549A6NIU2 74 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms