RNA–Protein interactions for RNA: ENST00000532542.1

TRIM3-211, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 4,419 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-211ENST00000532542 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
TRIM3-211ENST00000532542 FSHBP01225 129 aa8.33□□□□□ -1.08
TRIM3-211ENST00000532542 HILS1P60008 231 aa8.33□□□□□ -1.08
TRIM3-211ENST00000532542 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
TRIM3-211ENST00000532542 DEFB104AQ8WTQ1 72 aa8.33□□□□□ -1.08
TRIM3-211ENST00000532542 TMEM101Q96IK0 257 aa8.33□□□□□ -1.08
TRIM3-211ENST00000532542 A0A096LNT2 108 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 AZU1P20160 251 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 ADGRG4Q8IZF6 3080 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 IGHV4-4A0A075B6R2 117 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 HSD52Q0P140 79 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 KIR3DS1Q14943 382 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 C18orf65Q6ZTR6 163 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 NEGR1Q7Z3B1 354 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 SNHG12Q9BXW3 62 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 SPATA12Q7Z6I5 190 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
TRIM3-211ENST00000532542 IGHV3-16A0A0C4DH30 117 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 EREGO14944 169 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 Q8N2B8 174 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 ACANP16112 2415 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 F8VRH5 84 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 COX8AP10176 69 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 SEC11AP67812 179 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 LYRM7Q5U5X0 104 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 PRADC1Q9BSG0 188 aa8.31□□□□□ -1.08
TRIM3-211ENST00000532542 MRPL35Q9NZE8 188 aaKnown RBP8.31□□□□□ -1.08
TRIM3-211ENST00000532542 EDN2P20800 178 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 RHOHQ15669 191 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 NBEAQ8NFP9 2946 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 H3BRM9 83 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 PMVKQ15126 192 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 MPV17L2Q567V2 206 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 MRPL16Q9NX20 251 aaKnown RBP8.3□□□□□ -1.08
TRIM3-211ENST00000532542 DKK2Q9UBU2 259 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 A0A087WX48 190 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
TRIM3-211ENST00000532542 LY6G6DO95868 133 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 Q1RN00 199 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 ORAOV1Q8WV07 137 aa8.3□□□□□ -1.08
TRIM3-211ENST00000532542 SMIM13P0DJ93 91 aa8.29□□□□□ -1.08
TRIM3-211ENST00000532542 NDUFA11Q86Y39 141 aa8.29□□□□□ -1.08
TRIM3-211ENST00000532542 C9orf66Q5T8R8 295 aa8.29□□□□□ -1.08
TRIM3-211ENST00000532542 ZNF815PA8K554 130 aa8.29□□□□□ -1.08
TRIM3-211ENST00000532542 RAB37Q96AX2 223 aa8.29□□□□□ -1.08
TRIM3-211ENST00000532542 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
TRIM3-211ENST00000532542 PHLDA1Q8WV24 401 aaPredicted RBP8.28□□□□□ -1.08
TRIM3-211ENST00000532542 CRXO43186 299 aaPredicted RBP8.28□□□□□ -1.08
TRIM3-211ENST00000532542 JPT2Q9H910 190 aa8.28□□□□□ -1.08
TRIM3-211ENST00000532542 ATMQ13315 3056 aa8.28□□□□□ -1.08
TRIM3-211ENST00000532542 FABP2P12104 132 aa8.28□□□□□ -1.08
TRIM3-211ENST00000532542 WDFY3Q8IZQ1 3526 aa8.28□□□□□ -1.08
TRIM3-211ENST00000532542 SCGB1C2P0DMR2 95 aa8.28□□□□□ -1.08
TRIM3-211ENST00000532542 RASL10AQ92737 203 aa8.28□□□□□ -1.08
TRIM3-211ENST00000532542 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 INAFM1C9JVW0 142 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 NDUFA7O95182 113 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 ZFP2Q6ZN57 461 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 Q6ZQT7 251 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 INSL3P51460 131 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
TRIM3-211ENST00000532542 ADAMTSL5Q6ZMM2 481 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 C3orf56Q8N813 242 aa8.27□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE12BA1L429 117 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE7O76087 117 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE12FP0CL80 117 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE12GP0CL81 117 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE12IP0CL82 117 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 PRSS2P07478 247 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 DNAJC30Q96LL9 226 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 PRSS29PA6NIE9 313 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 ZNRF2Q8NHG8 242 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 C16orf74Q96GX8 76 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 URB1-AS1Q96HZ7 61 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 C16orf95Q9H693 158 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 APOC4P55056 127 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 PLEKHB2Q96CS7 222 aa8.26□□□□□ -1.09
TRIM3-211ENST00000532542 NOP10Q9NPE3 64 aaKnown RBP8.25□□□□□ -1.09
TRIM3-211ENST00000532542 LINC00469Q8N7U9 141 aa8.25□□□□□ -1.09
TRIM3-211ENST00000532542 TRAV12-1A0A0B4J245 112 aa8.25□□□□□ -1.09
TRIM3-211ENST00000532542 IGKV3OR2-268A0A0C4DH90 116 aa8.25□□□□□ -1.09
TRIM3-211ENST00000532542 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
TRIM3-211ENST00000532542 NRACQ8N912 160 aa8.25□□□□□ -1.09
TRIM3-211ENST00000532542 OR5A1Q8NGJ0 315 aa8.25□□□□□ -1.09
TRIM3-211ENST00000532542 JMJD1CQ15652 2540 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 SIVA1O15304 175 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 ZNF124Q15973 351 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 HIST2H2BDQ6DRA6 164 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 CHCHD5Q9BSY4 110 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 CHAC1Q9BUX1 264 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE12JA6NER3 117 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE1Q13065 139 aa8.24□□□□□ -1.09
TRIM3-211ENST00000532542 GAGE4Q13068 117 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms