RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 F8W735 103 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-214ENST00000530886 FAM222AQ5U5X8 452 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 MALRD1Q5VYJ5 2156 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 I3L3M4 83 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 PSMB8P28062 276 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 GFRALQ6UXV0 394 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 RPL39LQ96EH5 51 aaKnown RBP6.11□□□□□ -1.43
CSDE1-214ENST00000530886 BEX4Q9NWD9 120 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-214ENST00000530886 TP53TG1Q9Y2A0 90 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 VPS13CQ709C8 3753 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
CSDE1-214ENST00000530886 A0A1W2PNU3 283 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-214ENST00000530886 CCL3L1P16619 93 aa6.1□□□□□ -1.43
CSDE1-214ENST00000530886 POLR2KP53803 58 aaKnown RBP6.1□□□□□ -1.43
CSDE1-214ENST00000530886 C9orf47Q6ZRZ4 202 aa6.1□□□□□ -1.43
CSDE1-214ENST00000530886 LENEPQ9Y5L5 61 aa6.1□□□□□ -1.43
CSDE1-214ENST00000530886 BUB3O43684 328 aa6.1□□□□□ -1.43
CSDE1-214ENST00000530886 CLEC2BQ92478 149 aa6.1□□□□□ -1.43
CSDE1-214ENST00000530886 TRAV41A0A0B4J266 112 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 J3QLI3 93 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 NXPH4O95158 308 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 ASCL5Q7RTU5 278 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 TMEM61Q8N0U2 210 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 PRAC2D3DTV9 90 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 TIMM17BO60830 172 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 APELAP0DMC3 54 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 MIAQ16674 131 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 PRORYQ9H606 182 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 SLC25A15Q9Y619 301 aa6.09□□□□□ -1.43
CSDE1-214ENST00000530886 IGLV11-55A0A075B6I3 123 aa6.09□□□□□ -1.44
CSDE1-214ENST00000530886 SPRY3O43610 288 aa6.09□□□□□ -1.44
CSDE1-214ENST00000530886 ENSAO43768 121 aaKnown RBP6.09□□□□□ -1.44
CSDE1-214ENST00000530886 TRGV5A0A0B4J1U4 118 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 NDUFC2O95298 119 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 INAFM2P0DMQ5 153 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 BEAN1Q3B7T3 259 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 PMS2CLQ68D20 193 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 Q6JHZ5 121 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 EEF1AKMT3Q96AZ1 226 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 DSCR8Q96T75 97 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV1-46P01743 117 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 TMEM105Q8N8V8 129 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 VCYO14598 125 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 ARHGAP32A7KAX9 2087 aa6.08□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV3OR16-10A0A075B7F0 116 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV1-3A0A0C4DH29 117 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 TRBV6-5A0A0K0K1A5 114 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 SPRY2O43597 315 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 RHOHQ15669 191 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 NSUN5P1Q3KNT7 163 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 KIF25-AS1Q9Y6Z4 181 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 COX7A2LO14548 114 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 IGLV1-47P01700 117 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV1-8P0DP01 117 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 DEFB108BQ8NET1 73 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 C22orf24Q9Y442 160 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 PIEZO2Q9H5I5 2752 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 SDK1Q7Z5N4 2213 aa6.07□□□□□ -1.44
CSDE1-214ENST00000530886 TRAV8-3A0A0A6YYJ7 113 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 TINCRA0A1B0GVN0 87 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 LINC00315P59091 139 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 PRIMA1Q86XR5 153 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 C9orf85Q96MD7 179 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 NBR2O15453 112 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 PFN2P35080 140 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 LINC00477Q96M19 166 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 FANCD2OSQ96PS1 177 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 FAM186AA6NE01 2351 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 ZNF415Q09FC8 603 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 IGFL4Q6B9Z1 124 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 C9orf106Q8NAJ2 232 aa6.06□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV3-72A0A0B4J1Y9 119 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 DAZ2Q13117 558 aaKnown RBP6.05□□□□□ -1.44
CSDE1-214ENST00000530886 SEM1Q6ZVN7 128 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 DAZ4Q86SG3 579 aaKnown RBP6.05□□□□□ -1.44
CSDE1-214ENST00000530886 DAZ1Q9NQZ3 744 aaKnown RBP6.05□□□□□ -1.44
CSDE1-214ENST00000530886 DAZ3Q9NR90 486 aaKnown RBP6.05□□□□□ -1.44
CSDE1-214ENST00000530886 TIRAPP58753 221 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 DEFB127Q9H1M4 99 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 LRBAP50851 2863 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV3-30-3P0DP02 117 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 RPL39P62891 51 aaKnown RBP6.05□□□□□ -1.44
CSDE1-214ENST00000530886 KLK9Q2XQG4 91 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 ADAMTSL4-AS1Q5T5F5 129 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 TMEM86BQ8N661 226 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 PRSS33Q8NF86 280 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 KLK9Q9UKQ9 250 aa6.05□□□□□ -1.44
CSDE1-214ENST00000530886 CTSGP08311 255 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 LOXP28300 417 aaPredicted RBP6.04□□□□□ -1.44
CSDE1-214ENST00000530886 C22orf34Q6ZV56 151 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 RNF152Q8N8N0 203 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 NPBQ8NG41 125 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 KAAG1Q9UBP8 84 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 SERP1Q9Y6X1 66 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 BUB1B-PAK6H3BSN5 160 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 RS1O15537 224 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 RNASE4P34096 147 aaKnown RBP6.04□□□□□ -1.44
CSDE1-214ENST00000530886 LINC00336Q6ZUF6 198 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms