RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TRBV6-1A0A0K0K1D8 114 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 RBMY1BA6NDE4 496 aaKnown RBP3.2□□□□□ -1.9
USP48-211ENST00000526044 RBMY1EA6NEQ0 496 aaKnown RBP3.2□□□□□ -1.9
USP48-211ENST00000526044 ZNF727A8MUV8 499 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 TMEM250H0YL14 139 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 K7EQD1 137 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 GPX1P07203 203 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 RBMY1DP0C7P1 496 aaKnown RBP3.2□□□□□ -1.9
USP48-211ENST00000526044 CT45A10P0DMU9 189 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 TSPOP30536 169 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 LEPP41159 167 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 APOC4P55056 127 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 FXYD7P58549 80 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 TAS2R60P59551 318 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 TAL2Q16559 108 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 NDUFA5Q16718 116 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 MORN3Q6PF18 240 aaPredicted RBP3.2□□□□□ -1.9
USP48-211ENST00000526044 LINC00322Q6ZN03 302 aaPredicted RBP3.2□□□□□ -1.9
USP48-211ENST00000526044 COMMD7Q86VX2 200 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 BAGE2Q86Y30 109 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 EIF4E3Q8N5X7 224 aaKnown RBP3.2□□□□□ -1.9
USP48-211ENST00000526044 TMEM75Q8N9X5 138 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 C11orf52Q96A22 123 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 FMC1Q96HJ9 113 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 NDFIP1Q9BT67 221 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 WFDC10AQ9H1F0 79 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 SLC35B3Q9H1N7 401 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 PARLQ9H300 379 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 ZFP30Q9Y2G7 519 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 LENEPQ9Y5L5 61 aa3.2□□□□□ -1.9
USP48-211ENST00000526044 KIR2DL5BA0A0G2JN68 375 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 KIR2DL5BA0A0G2JPC4 375 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 TRBV7-9A0A0J9YWB2 115 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 A8MTW9 85 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 FABP5P3A8MUU1 101 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 C9JQL5 133 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 K7EIL1 84 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 CRISP2P16562 243 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 RNASE4P34096 147 aaKnown RBP3.19□□□□□ -1.9
USP48-211ENST00000526044 RPL35P42766 123 aaKnown RBP3.19□□□□□ -1.9
USP48-211ENST00000526044 GNG4P50150 75 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 DEFA6Q01524 100 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 SPINK13Q1W4C9 94 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 AMTNQ6UX39 209 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 TMEM183AQ8IXX5 376 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 KIR2DL5AQ8N109 375 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 C15orf54Q8N8G6 183 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 KIR2DL5BQ8NHK3 375 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 Q8TAT8 98 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 TVP23CQ96ET8 276 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 FAM19A4Q96LR4 140 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 ODF3Q96PU9 254 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 DERL1Q9BUN8 251 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 Q9HAA7 133 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 XCL2Q9UBD3 114 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 STAB1Q9NY15 2570 aa3.19□□□□□ -1.9
USP48-211ENST00000526044 TRAV12-2A0A075B6T6 113 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 TMEM218A2RU14 115 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 F5H768 121 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 F8W036 122 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 M0R2Z0 102 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 NXPH4O95158 308 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 LTAP01374 205 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 ORM1P02763 201 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 SFTA3P0C7M3 94 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 MGST1P10620 155 aaKnown RBP3.18□□□□□ -1.9
USP48-211ENST00000526044 S100A12P80511 92 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 OR5I1Q13606 314 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 CENPWQ5EE01 88 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 ZFAND2AQ8N6M9 145 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 PTH2Q96A98 100 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 SMIM12Q96EX1 92 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 IGF2BP2-AS1Q96M15 143 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 LINC01587Q99440 93 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 SMIM7Q9BQ49 75 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 C20orf144Q9BQM9 153 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 BIN3Q9NQY0 253 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
USP48-211ENST00000526044 TRRAPQ9Y4A5 3859 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 TRAV21A0A0B4J279 112 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 C7orf71A4D174 169 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 KLLNB2CW77 178 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 C9JCJ5 164 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 CRXO43186 299 aaPredicted RBP3.17□□□□□ -1.9
USP48-211ENST00000526044 GATCO43716 136 aaKnown RBP3.17□□□□□ -1.9
USP48-211ENST00000526044 ZNF324O75467 553 aaPredicted RBP3.17□□□□□ -1.9
USP48-211ENST00000526044 GCGP01275 180 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 INSP01308 110 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 PFN1P07737 140 aaKnown RBP3.17□□□□□ -1.9
USP48-211ENST00000526044 GIG44P09565 113 aaPredicted RBP3.17□□□□□ -1.9
USP48-211ENST00000526044 HTN1P15515 57 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 RAB4AP20338 218 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 S100A1P23297 94 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 CRIP1P50238 77 aa3.17□□□□□ -1.9
USP48-211ENST00000526044 ZNF80P51504 273 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms