RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 MYLKQ15746 1914 aa10.65□□□□□ -0.7
LRRK1-202ENST00000525284 TET1Q8NFU7 2136 aa10.65□□□□□ -0.7
LRRK1-202ENST00000525284 FREM3P0C091 2139 aa10.65□□□□□ -0.71
LRRK1-202ENST00000525284 KIAA2026Q5HYC2 2103 aa10.65□□□□□ -0.71
LRRK1-202ENST00000525284 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
LRRK1-202ENST00000525284 SLURP1P55000 103 aa10.64□□□□□ -0.71
LRRK1-202ENST00000525284 SCN5AQ14524 2016 aa10.64□□□□□ -0.71
LRRK1-202ENST00000525284 SBF1O95248 1867 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 NFE4Q86UQ8 179 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 Q8N1Y9 231 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 DEFB4AO15263 64 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 LOXP28300 417 aaPredicted RBP10.63□□□□□ -0.71
LRRK1-202ENST00000525284 HIGD1BQ9P298 99 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 NACAE9PAV3 2078 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 E9PLD3 99 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 IGHV4-38-2P0DP08 117 aa10.63□□□□□ -0.71
LRRK1-202ENST00000525284 GBF1Q92538 1859 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 GP9P14770 177 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 ZSWIM8A7E2V4 1837 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 COA6Q5JTJ3 125 aaKnown RBP10.62□□□□□ -0.71
LRRK1-202ENST00000525284 ZNF407Q9C0G0 2248 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 PIK3CD-AS1Q5SR53 167 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 TOMM6Q96B49 74 aa10.62□□□□□ -0.71
LRRK1-202ENST00000525284 TMEM263Q8WUH6 116 aaKnown RBP10.62□□□□□ -0.71
LRRK1-202ENST00000525284 IGLV3-19P01714 112 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 SLPIP03973 132 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 C11orf86A6NJI1 115 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 CD59P13987 128 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 NDUFA11Q86Y39 141 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 LMO1P25800 156 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 VWCEQ96DN2 955 aa10.61□□□□□ -0.71
LRRK1-202ENST00000525284 RETNQ9HD89 108 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 SIRPDQ9H106 197 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 CENPVL3A0A0U1RRI6 287 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 B3GALT5-AS1P59052 145 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 RLFQ13129 1914 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 C9orf66Q5T8R8 295 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 FAM19A1Q7Z5A9 133 aa10.6□□□□□ -0.71
LRRK1-202ENST00000525284 Q8TCH9 128 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 IGHV1-58A0A0C4DH39 117 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 C20orf173Q96LM9 149 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 LENEPQ9Y5L5 61 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 DOCK4Q8N1I0 1966 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 J3QLI3 93 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 J3QKU1 62 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 Q8N9L7 120 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 MED12Q93074 2177 aa10.59□□□□□ -0.71
LRRK1-202ENST00000525284 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 Q6ZR03 302 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 Q8N9W7 124 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 HEATR5AQ86XA9 2040 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 DEFB112Q30KQ8 113 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 LINC00311Q8N616 119 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 IGKV1D-37A0A075B6S9 117 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 IGHV4-61A0A0C4DH41 118 aa10.58□□□□□ -0.72
LRRK1-202ENST00000525284 WT1P19544 449 aaPredicted RBP10.58□□□□□ -0.72
LRRK1-202ENST00000525284 SERP2Q8N6R1 65 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 CHD3Q12873 2000 aaKnown RBP10.57□□□□□ -0.72
LRRK1-202ENST00000525284 H3BUA1 57 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 PMAIP1Q13794 54 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 WFDC13Q8IUB5 93 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 SDK2Q58EX2 2172 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 SPINK6Q6UWN8 80 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 C15orf65H3BRN8 121 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 C9orf85Q96MD7 179 aa10.57□□□□□ -0.72
LRRK1-202ENST00000525284 A0A087WZ39 114 aa10.56□□□□□ -0.72
LRRK1-202ENST00000525284 CEMP1Q6PRD7 247 aaPredicted RBP10.56□□□□□ -0.72
LRRK1-202ENST00000525284 C3orf84H3BNL1 204 aa10.56□□□□□ -0.72
LRRK1-202ENST00000525284 MIAQ16674 131 aa10.56□□□□□ -0.72
LRRK1-202ENST00000525284 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
LRRK1-202ENST00000525284 DYSFO75923 2080 aa10.55□□□□□ -0.72
LRRK1-202ENST00000525284 ATP5EP56381 51 aaPredicted RBP10.55□□□□□ -0.72
LRRK1-202ENST00000525284 FOXL2NBQ6ZUU3 175 aa10.55□□□□□ -0.72
LRRK1-202ENST00000525284 SPTBN2O15020 2390 aa10.55□□□□□ -0.72
LRRK1-202ENST00000525284 VPREB3Q9UKI3 123 aa10.55□□□□□ -0.72
LRRK1-202ENST00000525284 IGKV1-17P01599 117 aa10.54□□□□□ -0.72
LRRK1-202ENST00000525284 NDUFA7O95182 113 aa10.54□□□□□ -0.72
LRRK1-202ENST00000525284 HRCT1Q6UXD1 115 aa10.54□□□□□ -0.72
LRRK1-202ENST00000525284 TNRC6BQ9UPQ9 1833 aaKnown RBP10.54□□□□□ -0.72
LRRK1-202ENST00000525284 DOCK6Q96HP0 2047 aa10.54□□□□□ -0.72
LRRK1-202ENST00000525284 DEFB135Q30KP9 77 aa10.54□□□□□ -0.72
LRRK1-202ENST00000525284 AJUBAQ96IF1 538 aa10.54□□□□□ -0.72
LRRK1-202ENST00000525284 ODF1Q14990 250 aa10.53□□□□□ -0.72
LRRK1-202ENST00000525284 Q6ZS92 163 aa10.53□□□□□ -0.72
LRRK1-202ENST00000525284 KIR2DL5BQ8NHK3 375 aa10.53□□□□□ -0.72
LRRK1-202ENST00000525284 BLCAPP62952 87 aa10.53□□□□□ -0.72
LRRK1-202ENST00000525284 ATP5EP2Q5VTU8 51 aa10.53□□□□□ -0.72
LRRK1-202ENST00000525284 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
LRRK1-202ENST00000525284 FAM19A3Q7Z5A8 133 aa10.52□□□□□ -0.72
LRRK1-202ENST00000525284 GTF3C1Q12789 2109 aa10.52□□□□□ -0.73
LRRK1-202ENST00000525284 DOCK7Q96N67 2140 aa10.52□□□□□ -0.73
LRRK1-202ENST00000525284 VWA8A3KMH1 1905 aa10.52□□□□□ -0.73
LRRK1-202ENST00000525284 NDUFC1O43677 76 aa10.52□□□□□ -0.73
LRRK1-202ENST00000525284 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
LRRK1-202ENST00000525284 TNRC6AQ8NDV7 1962 aaKnown RBP10.52□□□□□ -0.73
LRRK1-202ENST00000525284 CCKP06307 115 aa10.51□□□□□ -0.73
LRRK1-202ENST00000525284 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
LRRK1-202ENST00000525284 FAM30AQ9NZY2 134 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms