RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 AQP4P55087 323 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 DNAJB13P59910 316 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 KRTAP10-7P60409 375 aaPredicted RBP4.45□□□□□ -1.7
PFDN1-207ENST00000524074 C1orf140Q5VVS0 124 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 ZCCHC23Q6ZST2 131 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 Q6ZTI0 123 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 CLECL1Q8IZS7 167 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 PPP3R2Q96LZ3 170 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 CCDC115Q96NT0 180 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 LINC00470Q9BZP3 86 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 DNAJC15Q9Y5T4 150 aa4.45□□□□□ -1.7
PFDN1-207ENST00000524074 ARRDC5A6NEK1 342 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 FUSP35637 526 aaKnown RBP eCLIP4.44□□□□□ -1.7
PFDN1-207ENST00000524074 DYNLT3P51808 116 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 COPZ1P61923 177 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 CCL8P80075 99 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 S100A12P80511 92 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 OR2T10Q8NGZ9 312 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 MAFIPQ8WZ33 124 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 AQP3Q92482 292 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 BORCS8Q96FH0 119 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 PRADC1Q9BSG0 188 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 DPY30Q9C005 99 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 C6orf62Q9GZU0 229 aaPredicted RBP4.44□□□□□ -1.7
PFDN1-207ENST00000524074 TMEM126AQ9H061 195 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 NHP2Q9NX24 153 aaKnown RBP4.44□□□□□ -1.7
PFDN1-207ENST00000524074 WNK1Q9H4A3 2382 aa4.44□□□□□ -1.7
PFDN1-207ENST00000524074 PKD1L1Q8TDX9 2849 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 NDUFB3O43676 98 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 PMP2P02689 132 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 OR10J4P0C629 311 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 RHOGP84095 191 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 CCDC153Q494R4 210 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 Q6ZQT0 140 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 DHFR2Q86XF0 187 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 PDZD9Q8IXQ8 264 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 OR8B3Q8NGG8 313 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 POP5Q969H6 163 aaKnown RBP4.43□□□□□ -1.7
PFDN1-207ENST00000524074 CARD19Q96LW7 228 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 YIPF3Q9GZM5 350 aa4.43□□□□□ -1.7
PFDN1-207ENST00000524074 SDCBPO00560 298 aaPredicted RBP4.42□□□□□ -1.7
PFDN1-207ENST00000524074 DBIP07108 87 aaKnown RBP4.42□□□□□ -1.7
PFDN1-207ENST00000524074 BCL2P10415 239 aa4.42□□□□□ -1.7
PFDN1-207ENST00000524074 SLC38A11Q08AI6 406 aa4.42□□□□□ -1.7
PFDN1-207ENST00000524074 ARFGEF3Q5TH69 2177 aa4.42□□□□□ -1.7
PFDN1-207ENST00000524074 EIF5AL1Q6IS14 154 aaKnown RBP4.42□□□□□ -1.7
PFDN1-207ENST00000524074 DEFB108BQ8NET1 73 aa4.42□□□□□ -1.7
PFDN1-207ENST00000524074 NPCDR1Q9BY65 106 aa4.42□□□□□ -1.7
PFDN1-207ENST00000524074 SOX21Q9Y651 276 aaPredicted RBP4.42□□□□□ -1.7
PFDN1-207ENST00000524074 DSPPQ9NZW4 1301 aa4.42□□□□□ -1.7
PFDN1-207ENST00000524074 A0A096LPI6 279 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 TRDV1A0A1B0GX56 115 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 HMGN4O00479 90 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 PGLYRP1O75594 196 aaPredicted RBP4.41□□□□□ -1.7
PFDN1-207ENST00000524074 UBL3O95164 117 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 SHBGP04278 402 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 SMCO1Q147U7 214 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 SLC30A7Q8NEW0 376 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 ADAT1Q9BUB4 502 aaKnown RBP4.41□□□□□ -1.7
PFDN1-207ENST00000524074 CACYBPQ9HB71 228 aaKnown RBP4.41□□□□□ -1.7
PFDN1-207ENST00000524074 NBEAL2Q6ZNJ1 2754 aa4.41□□□□□ -1.7
PFDN1-207ENST00000524074 IGLV3-9A0A075B6K5 115 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 CLPSL1A2RUU4 121 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 KPNA4O00629 521 aaPredicted RBP4.4□□□□□ -1.71
PFDN1-207ENST00000524074 ARPC5O15511 151 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 C1QCP02747 245 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 RPL7P18124 248 aaKnown RBP4.4□□□□□ -1.71
PFDN1-207ENST00000524074 S100A11P31949 105 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 TMBIM6P55061 237 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 EMX2Q04743 252 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 ZNF345Q14585 488 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 SOSTDC1Q6X4U4 206 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 C4orf33Q8N1A6 199 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 SLC25A21Q9BQT8 299 aaPredicted RBP4.4□□□□□ -1.71
PFDN1-207ENST00000524074 TRRAPQ9Y4A5 3859 aa4.4□□□□□ -1.71
PFDN1-207ENST00000524074 TRAV36DV7A0A075B6V5 113 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 ODAMA1E959 279 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 CXCL1P09341 107 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 S100A3P33764 101 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 LZICQ8WZA0 190 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 OTORQ9NRC9 128 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 MED31Q9Y3C7 131 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 ARHGAP32A7KAX9 2087 aa4.39□□□□□ -1.71
PFDN1-207ENST00000524074 PRKDCP78527 4128 aaKnown RBP4.38□□□□□ -1.71
PFDN1-207ENST00000524074 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 A0A0G2JQZ4 141 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 PIN1P1O15428 100 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 CST7O76096 145 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 GADD45GO95257 159 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 CTSDP07339 412 aaPredicted RBP4.38□□□□□ -1.71
PFDN1-207ENST00000524074 GTF2A1P52655 376 aaPredicted RBP4.38□□□□□ -1.71
PFDN1-207ENST00000524074 MSMO1Q15800 293 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 WHAMMP3Q1A5X7 153 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 DEFB112Q30KQ8 113 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 LINC00471Q8N535 108 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 OR4D11Q8NGI4 311 aa4.38□□□□□ -1.71
PFDN1-207ENST00000524074 TMEM106BQ9NUM4 274 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms