RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 IFNA17P01571 189 aa1.24□□□□□ -2.21
PTPN12-214ENST00000520947 IFNGP01579 166 aa1.24□□□□□ -2.21
PTPN12-214ENST00000520947 AKAIN1P0CW23 69 aa1.24□□□□□ -2.21
PTPN12-214ENST00000520947 HIST1H1DP16402 221 aaKnown RBP1.24□□□□□ -2.21
PTPN12-214ENST00000520947 C9orf116Q5BN46 136 aaPredicted RBP1.24□□□□□ -2.21
PTPN12-214ENST00000520947 TSKUQ8WUA8 353 aa1.24□□□□□ -2.21
PTPN12-214ENST00000520947 RPRMQ9NS64 109 aa1.24□□□□□ -2.21
PTPN12-214ENST00000520947 A2ML1A8K2U0 1454 aa1.24□□□□□ -2.21
PTPN12-214ENST00000520947 ZNF142P52746 1687 aaPredicted RBP1.23□□□□□ -2.21
PTPN12-214ENST00000520947 TRAV12-3A0A0B4J271 114 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 TFF1P04155 84 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 CBLN1P23435 193 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 KLKP1Q107X0 134 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 PP6455Q8WZ26 134 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 CGREF1Q99674 301 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 COA4Q9NYJ1 87 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 EML5Q05BV3 1969 aa1.23□□□□□ -2.21
PTPN12-214ENST00000520947 SPAG17Q6Q759 2223 aa1.22□□□□□ -2.21
PTPN12-214ENST00000520947 LOC100130705A0A1B0GUX0 176 aa1.22□□□□□ -2.21
PTPN12-214ENST00000520947 FXYD1O00168 92 aa1.22□□□□□ -2.21
PTPN12-214ENST00000520947 ZNF56Q15929 161 aa1.22□□□□□ -2.21
PTPN12-214ENST00000520947 LINC00208Q96KT6 92 aa1.22□□□□□ -2.21
PTPN12-214ENST00000520947 PLXNA2O75051 1894 aa1.22□□□□□ -2.21
PTPN12-214ENST00000520947 KTN1Q86UP2 1357 aaKnown RBP1.21□□□□□ -2.21
PTPN12-214ENST00000520947 RREB1Q92766 1687 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 TRBV10-3A0A0K0K1G6 114 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 MCRIP1C9JLW8 97 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 MRPS10P82664 201 aaKnown RBP1.21□□□□□ -2.22
PTPN12-214ENST00000520947 Q56UQ5 140 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 BET1LQ9NYM9 111 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 CASP8AP2Q9UKL3 1982 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 DLEC1Q9Y238 1755 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 ROS1P08922 2347 aa1.21□□□□□ -2.22
PTPN12-214ENST00000520947 TRPM7Q96QT4 1865 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 ASCC3Q8N3C0 2202 aaKnown RBP1.2□□□□□ -2.22
PTPN12-214ENST00000520947 IFT140Q96RY7 1462 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 KDM6BO15054 1643 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 NPC2P61916 151 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 UBE2G1P62253 170 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 SPINK13Q1W4C9 94 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 Q8N6K4 173 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 LSM10Q969L4 123 aaKnown RBP1.2□□□□□ -2.22
PTPN12-214ENST00000520947 TMEM14BQ9NUH8 114 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 SCN3BQ9NY72 215 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 GNG8Q9UK08 70 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 LAMB1P07942 1786 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 AKAP11Q9UKA4 1901 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 MYH13Q9UKX3 1938 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 CHD3Q12873 2000 aaKnown RBP1.2□□□□□ -2.22
PTPN12-214ENST00000520947 CNTRLQ7Z7A1 2325 aa1.2□□□□□ -2.22
PTPN12-214ENST00000520947 RIMS1Q86UR5 1692 aaKnown RBP1.2□□□□□ -2.22
PTPN12-214ENST00000520947 ZGRF1Q86YA3 2104 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 MYOM2P54296 1465 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 SPAARA0A1B0GVQ0 90 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 MIF4GDA9UHW6 222 aaKnown RBP1.19□□□□□ -2.22
PTPN12-214ENST00000520947 F6UZH7 168 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 APOC4-APOC2K7ER74 178 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 CORTO00230 105 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 TNFP01375 233 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 APOC2P02655 101 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 CCL3L1P16619 93 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 GNG4P50150 75 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 FXYD6P3P58550 94 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 SSBP1Q04837 148 aaKnown RBP1.19□□□□□ -2.22
PTPN12-214ENST00000520947 BCORL1Q5H9F3 1711 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 C4orf33Q8N1A6 199 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 C10orf82Q8WW14 230 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 SPANXDQ9BXN6 97 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 FOCADQ5VW36 1801 aa1.19□□□□□ -2.22
PTPN12-214ENST00000520947 NCOA6Q14686 2063 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-214ENST00000520947 KIF13AQ9H1H9 1805 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 RBAKDNA6NC62 111 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 K7EIL1 84 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 TPPP2P59282 170 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 S100A7L2Q5SY68 101 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 ZNF818PQ6ZRF7 136 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 MYH6P13533 1939 aa1.18□□□□□ -2.22
PTPN12-214ENST00000520947 QRICH2Q9H0J4 1663 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 SNAPC5O75971 98 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 S100PP25815 95 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 UBE2D1P51668 147 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 CCL8P80075 99 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 FAM74A4Q5TZK3 123 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 C20orf197Q8N268 126 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 Q8N8P6 123 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 SPTSSBQ8NFR3 76 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 PPP3R2Q96LZ3 170 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 DSCR8Q96T75 97 aa1.17□□□□□ -2.22
PTPN12-214ENST00000520947 COX7B2Q8TF08 81 aa1.16□□□□□ -2.22
PTPN12-214ENST00000520947 PLAC4Q8WY50 150 aa1.16□□□□□ -2.22
PTPN12-214ENST00000520947 IER3IP1Q9Y5U9 82 aa1.16□□□□□ -2.22
PTPN12-214ENST00000520947 SPEF2Q9C093 1822 aa1.16□□□□□ -2.22
PTPN12-214ENST00000520947 TRBV7-1A0A0A6YYK4 115 aa1.15□□□□□ -2.23
PTPN12-214ENST00000520947 ELOF1P60002 83 aaKnown RBP1.15□□□□□ -2.23
PTPN12-214ENST00000520947 PPP3R1P63098 170 aa1.15□□□□□ -2.23
PTPN12-214ENST00000520947 CATR1Q13166 79 aa1.15□□□□□ -2.23
PTPN12-214ENST00000520947 MRPL54Q6P161 138 aaKnown RBP1.15□□□□□ -2.23
PTPN12-214ENST00000520947 C8orf59Q8N0T1 100 aaPredicted RBP1.15□□□□□ -2.23
PTPN12-214ENST00000520947 TCEAL7Q9BRU2 100 aa1.15□□□□□ -2.23
PTPN12-214ENST00000520947 NINQ8N4C6 2090 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms