RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 DIRAS2Q96HU8 199 aa3.6□□□□□ -1.83
CTNNA1-216ENST00000519489 MIXL1Q9H2W2 232 aa3.6□□□□□ -1.83
CTNNA1-216ENST00000519489 NAA60Q9H7X0 242 aa3.6□□□□□ -1.83
CTNNA1-216ENST00000519489 LOC107984640A0A0U1RRK4 108 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 TRDV1A0A1B0GX56 115 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 A8MWV9 139 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 COX7A2P2O60397 106 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 SYCNQ0VAF6 134 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 C1orf146Q5VVC0 180 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 C10orf113Q5VZT2 155 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 ATP5SQ99766 215 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 BCL7BQ9BQE9 202 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 NPVFQ9HCQ7 196 aa3.59□□□□□ -1.83
CTNNA1-216ENST00000519489 TRAV21A0A0B4J279 112 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 WRBO00258 174 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 RRAS2P62070 204 aaPredicted RBP3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 RPL36AP83881 106 aaKnown RBP3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 LGALSLQ3ZCW2 172 aaPredicted RBP3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 ZFP69Q49AA0 526 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 SPANXN5Q5MJ07 72 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 MGST2Q99735 147 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 C9orf16Q9BUW7 83 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 PHLDA3Q9Y5J5 127 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 TIMM9Q9Y5J7 89 aa3.58□□□□□ -1.84
CTNNA1-216ENST00000519489 CTAG1AP78358 180 aa3.57□□□□□ -1.84
CTNNA1-216ENST00000519489 PDE6HQ13956 83 aa3.57□□□□□ -1.84
CTNNA1-216ENST00000519489 EIF5AL1Q6IS14 154 aaKnown RBP3.57□□□□□ -1.84
CTNNA1-216ENST00000519489 PHYHIPLQ96FC7 376 aa3.57□□□□□ -1.84
CTNNA1-216ENST00000519489 SDHCQ99643 169 aaPredicted RBP3.57□□□□□ -1.84
CTNNA1-216ENST00000519489 TMEM14CQ9P0S9 112 aa3.57□□□□□ -1.84
CTNNA1-216ENST00000519489 TRBV10-1A0A0K0K1A3 114 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 FGF6P10767 208 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 PRSS3P35030 304 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 ARL16Q0P5N6 197 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 FAM74A4Q5TZK3 123 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 MIC13Q5XKP0 118 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 FAM19A5Q7Z5A7 132 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 S100A7AQ86SG5 101 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 C3orf22Q8N5N4 141 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 MITD1Q8WV92 249 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 CHCHD10Q8WYQ3 142 aaPredicted RBP3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 FAM167A-AS1Q96KT0 104 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 RNF24Q9Y225 148 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 LENEPQ9Y5L5 61 aa3.56□□□□□ -1.84
CTNNA1-216ENST00000519489 A0A0B4J2A0 478 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 IGKV3OR2-268A0A0C4DH90 116 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 GOSR2O14653 212 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 CD3DP04234 171 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 SDC2P34741 201 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 PKIAP61925 76 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 RPL18AQ02543 176 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 MXD1Q05195 221 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 IQCJQ1A5X6 159 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 NUP35Q8NFH5 326 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 OR51S1Q8NGJ8 323 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 MPLKIPQ8TAP9 179 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 KIR2DL4Q99706 377 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 SLC25A2Q9BXI2 301 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 TXNL4BQ9NX01 149 aaKnown RBP3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 NDUFB11Q9NX14 153 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 CACFD1Q9UGQ2 172 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 SHPKQ9UHJ6 478 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 PKIGQ9Y2B9 76 aa3.55□□□□□ -1.84
CTNNA1-216ENST00000519489 IGKV3D-20A0A0C4DH25 116 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 APOMO95445 188 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 AKR1C4P17516 323 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 GCSAMLQ5JQS6 135 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 PIK3CD-AS1Q5SR53 167 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 TERB2Q8NHR7 220 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 ZFAND1Q8TCF1 268 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 DERL1Q9BUN8 251 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 AAMDCQ9H7C9 122 aa3.54□□□□□ -1.84
CTNNA1-216ENST00000519489 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 TRBV6-1A0A0K0K1D8 114 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 A0A1B0GVG6 124 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 RHODO00212 210 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 SYNGR2O43760 224 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 SULT1A2P50226 295 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 S100A10P60903 97 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 GNGT1P63211 74 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 RPP30P78346 268 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 SFRP2Q96HF1 295 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 AQP10Q96PS8 301 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 CTDSP1Q9GZU7 261 aa3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 GPN1Q9HCN4 374 aaPredicted RBP3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 STRAPQ9Y3F4 350 aaKnown RBP3.53□□□□□ -1.84
CTNNA1-216ENST00000519489 TRAV6A0A075B6T7 132 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 CIB2O75838 187 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 NBEAP1P0C6P0 100 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 CAMPP49913 170 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 UBE2BP63146 152 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 RAB32Q13637 225 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 FAM229BQ4G0N7 80 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 FAAP20Q6NZ36 180 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 C8orf59Q8N0T1 100 aaPredicted RBP3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 DAND5Q8N907 189 aa3.52□□□□□ -1.85
CTNNA1-216ENST00000519489 TMED6Q8WW62 240 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms