RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KIF25-AS1Q9Y6Z4 181 aa10.57□□□□□ -0.72
CLN8-204ENST00000519254 S100A12P80511 92 aa10.56□□□□□ -0.72
CLN8-204ENST00000519254 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
CLN8-204ENST00000519254 AP1S3Q96PC3 154 aa10.56□□□□□ -0.72
CLN8-204ENST00000519254 A0A096LNJ9 63 aa10.55□□□□□ -0.72
CLN8-204ENST00000519254 LINC01546A6NGU7 62 aa10.55□□□□□ -0.72
CLN8-204ENST00000519254 LINC00315P59091 139 aa10.55□□□□□ -0.72
CLN8-204ENST00000519254 EGFEM1PQ0D2K5 195 aa10.55□□□□□ -0.72
CLN8-204ENST00000519254 POM121L12Q8N7R1 296 aa10.55□□□□□ -0.72
CLN8-204ENST00000519254 JPT2Q9H910 190 aa10.55□□□□□ -0.72
CLN8-204ENST00000519254 TRGV11A0A075B6L2 103 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 CBY3A6NI87 242 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 LEPROTL1O95214 131 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 SAMD5Q5TGI4 173 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 ZNF664Q8N3J9 261 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 XCL2Q9UBD3 114 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 PRM2P04554 102 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 NUTF2P61970 127 aaKnown RBP10.54□□□□□ -0.72
CLN8-204ENST00000519254 TEX43Q6ZNM6 134 aa10.54□□□□□ -0.72
CLN8-204ENST00000519254 MGPP08493 103 aa10.53□□□□□ -0.72
CLN8-204ENST00000519254 BTF3P20290 206 aaKnown RBP10.53□□□□□ -0.72
CLN8-204ENST00000519254 SPATA12Q7Z6I5 190 aa10.53□□□□□ -0.72
CLN8-204ENST00000519254 RASL10AQ92737 203 aa10.53□□□□□ -0.72
CLN8-204ENST00000519254 NXT2Q9NPJ8 142 aaKnown RBP10.53□□□□□ -0.72
CLN8-204ENST00000519254 CMYA5Q8N3K9 4069 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 INSP01308 110 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 HTN1P15515 57 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 Q8N8P6 123 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 C20orf144Q9BQM9 153 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 LINC00467Q9BRT7 94 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 PRO1933Q9H354 126 aa10.52□□□□□ -0.72
CLN8-204ENST00000519254 ZMAT5Q9UDW3 170 aaKnown RBP10.52□□□□□ -0.72
CLN8-204ENST00000519254 PKD1L1Q8TDX9 2849 aa10.52□□□□□ -0.73
CLN8-204ENST00000519254 PKIAP61925 76 aa10.52□□□□□ -0.73
CLN8-204ENST00000519254 SYT8Q8NBV8 401 aa10.52□□□□□ -0.73
CLN8-204ENST00000519254 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
CLN8-204ENST00000519254 NACAE9PAV3 2078 aa10.51□□□□□ -0.73
CLN8-204ENST00000519254 A0A087WWL8 130 aa10.51□□□□□ -0.73
CLN8-204ENST00000519254 SMIM17P0DL12 118 aa10.51□□□□□ -0.73
CLN8-204ENST00000519254 KRTAP21-3Q3LHN1 58 aa10.51□□□□□ -0.73
CLN8-204ENST00000519254 RPL39LQ96EH5 51 aaKnown RBP10.51□□□□□ -0.73
CLN8-204ENST00000519254 LINC01587Q99440 93 aa10.51□□□□□ -0.73
CLN8-204ENST00000519254 HSPB8Q9UJY1 196 aa10.51□□□□□ -0.73
CLN8-204ENST00000519254 IGHV3OR16-12A0A075B7B8 117 aa10.5□□□□□ -0.73
CLN8-204ENST00000519254 SYS1-DBNDD2H3BUS1 97 aa10.5□□□□□ -0.73
CLN8-204ENST00000519254 CRYGDP07320 174 aa10.5□□□□□ -0.73
CLN8-204ENST00000519254 IGHV4-30-4P0DP06 118 aa10.5□□□□□ -0.73
CLN8-204ENST00000519254 ZNF876PQ49A33 203 aa10.5□□□□□ -0.73
CLN8-204ENST00000519254 C1orf158Q8N1D5 194 aa10.5□□□□□ -0.73
CLN8-204ENST00000519254 LINC00587B1AMM8 73 aa10.49□□□□□ -0.73
CLN8-204ENST00000519254 PRB2P02812 416 aaPredicted RBP10.49□□□□□ -0.73
CLN8-204ENST00000519254 GIG44P09565 113 aaPredicted RBP10.49□□□□□ -0.73
CLN8-204ENST00000519254 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
CLN8-204ENST00000519254 TMEM208Q9BTX3 173 aa10.49□□□□□ -0.73
CLN8-204ENST00000519254 HBDP02042 147 aa10.49□□□□□ -0.73
CLN8-204ENST00000519254 C11orf72Q8NBR9 251 aa10.49□□□□□ -0.73
CLN8-204ENST00000519254 C20orf78Q9BR46 151 aa10.49□□□□□ -0.73
CLN8-204ENST00000519254 CSTL1Q9H114 145 aa10.49□□□□□ -0.73
CLN8-204ENST00000519254 FCER1GP30273 86 aa10.48□□□□□ -0.73
CLN8-204ENST00000519254 SUMO2P61956 95 aaKnown RBP10.48□□□□□ -0.73
CLN8-204ENST00000519254 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
CLN8-204ENST00000519254 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
CLN8-204ENST00000519254 MAP1LC3CQ9BXW4 147 aa10.48□□□□□ -0.73
CLN8-204ENST00000519254 TSTD3H0UI37 97 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 ZNF415Q09FC8 603 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 FAM74A4Q5TZK3 123 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 F5H697 171 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 M0R2P5 195 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 TCAPO15273 167 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 PPP1R17O96001 155 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 AZU1P20160 251 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 PTH2Q96A98 100 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 VAMP8Q9BV40 100 aa10.47□□□□□ -0.73
CLN8-204ENST00000519254 APOC4P55056 127 aa10.46□□□□□ -0.74
CLN8-204ENST00000519254 LAGE3Q14657 143 aa10.46□□□□□ -0.74
CLN8-204ENST00000519254 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
CLN8-204ENST00000519254 ATOH7Q8N100 152 aa10.46□□□□□ -0.74
CLN8-204ENST00000519254 PAM16Q9Y3D7 125 aa10.46□□□□□ -0.74
CLN8-204ENST00000519254 PIK3CD-AS1Q5SR53 167 aa10.45□□□□□ -0.74
CLN8-204ENST00000519254 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
CLN8-204ENST00000519254 LINC01545Q5VT33 79 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 SPXQ9BT56 116 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 H0Y8G0 127 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 M0QY20 66 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 DDTP30046 118 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
CLN8-204ENST00000519254 ZNF56Q15929 161 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 CSNK1G2-AS1Q8NCQ2 148 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 IFI27L1Q96BM0 104 aa10.44□□□□□ -0.74
CLN8-204ENST00000519254 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
CLN8-204ENST00000519254 DEFB135Q30KP9 77 aa10.43□□□□□ -0.74
CLN8-204ENST00000519254 KPRPQ5T749 579 aaPredicted RBP10.43□□□□□ -0.74
CLN8-204ENST00000519254 UFSP1Q6NVU6 142 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms