RNA–Protein interactions for RNA: ENST00000515011.5

PDE4D-223, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,175 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-223ENST00000515011 RBMY1DP0C7P1 496 aaKnown RBP16.87■□□□□ 0.29
PDE4D-223ENST00000515011 TRAV25A0A0B4J276 109 aa16.86■□□□□ 0.29
PDE4D-223ENST00000515011 SYT8Q8NBV8 401 aa16.86■□□□□ 0.29
PDE4D-223ENST00000515011 JPT2Q9H910 190 aa16.86■□□□□ 0.29
PDE4D-223ENST00000515011 TRGV11A0A075B6L2 103 aa16.85■□□□□ 0.29
PDE4D-223ENST00000515011 K7EMI3 77 aa16.85■□□□□ 0.29
PDE4D-223ENST00000515011 RBMY1A1P0DJD3 496 aaKnown RBP16.85■□□□□ 0.29
PDE4D-223ENST00000515011 RBMY1CP0DJD4 496 aa16.85■□□□□ 0.29
PDE4D-223ENST00000515011 RBMY1FQ15415 496 aaKnown RBP16.85■□□□□ 0.29
PDE4D-223ENST00000515011 ZNF124Q15973 351 aa16.85■□□□□ 0.29
PDE4D-223ENST00000515011 ZNF256Q9Y2P7 627 aaPredicted RBP16.85■□□□□ 0.29
PDE4D-223ENST00000515011 ATP5LO75964 103 aa16.84■□□□□ 0.29
PDE4D-223ENST00000515011 ACANP16112 2415 aa16.84■□□□□ 0.29
PDE4D-223ENST00000515011 ORMDL2Q53FV1 153 aa16.84■□□□□ 0.29
PDE4D-223ENST00000515011 SLC25A34Q6PIV7 304 aa16.84■□□□□ 0.29
PDE4D-223ENST00000515011 NUTF2P61970 127 aaKnown RBP16.82■□□□□ 0.28
PDE4D-223ENST00000515011 SUMO4Q6EEV6 95 aa16.82■□□□□ 0.28
PDE4D-223ENST00000515011 A0A087WWL8 130 aa16.82■□□□□ 0.28
PDE4D-223ENST00000515011 NUDT3O95989 172 aa16.82■□□□□ 0.28
PDE4D-223ENST00000515011 RPL32P62910 135 aaKnown RBP16.82■□□□□ 0.28
PDE4D-223ENST00000515011 ODF1Q14990 250 aa16.82■□□□□ 0.28
PDE4D-223ENST00000515011 SMR3AQ99954 134 aa16.82■□□□□ 0.28
PDE4D-223ENST00000515011 SORL1Q92673 2214 aa16.82■□□□□ 0.28
PDE4D-223ENST00000515011 NDUFA7O95182 113 aa16.81■□□□□ 0.28
PDE4D-223ENST00000515011 DKK2Q9UBU2 259 aa16.81■□□□□ 0.28
PDE4D-223ENST00000515011 CBY3A6NI87 242 aa16.81■□□□□ 0.28
PDE4D-223ENST00000515011 BATFQ16520 125 aa16.81■□□□□ 0.28
PDE4D-223ENST00000515011 TP73-AS1Q9UF72 201 aa16.81■□□□□ 0.28
PDE4D-223ENST00000515011 PRSS1P07477 247 aa16.79■□□□□ 0.28
PDE4D-223ENST00000515011 COX8AP10176 69 aa16.79■□□□□ 0.28
PDE4D-223ENST00000515011 ANKRD39Q53RE8 183 aa16.79■□□□□ 0.28
PDE4D-223ENST00000515011 CLUHP3Q96NS8 147 aa16.79■□□□□ 0.28
PDE4D-223ENST00000515011 ZMAT4Q9H898 229 aa16.79■□□□□ 0.28
PDE4D-223ENST00000515011 CSTL1Q9H114 145 aa16.79■□□□□ 0.28
PDE4D-223ENST00000515011 CRYGDP07320 174 aa16.78■□□□□ 0.28
PDE4D-223ENST00000515011 ODF3L2Q3SX64 289 aa16.78■□□□□ 0.28
PDE4D-223ENST00000515011 TOMM6Q96B49 74 aa16.78■□□□□ 0.28
PDE4D-223ENST00000515011 F5H697 171 aa16.77■□□□□ 0.28
PDE4D-223ENST00000515011 ZNF876PQ49A33 203 aa16.77■□□□□ 0.27
PDE4D-223ENST00000515011 FAM74A4Q5TZK3 123 aa16.77■□□□□ 0.27
PDE4D-223ENST00000515011 TRBV6-5A0A0K0K1A5 114 aa16.76■□□□□ 0.27
PDE4D-223ENST00000515011 LY6G6DO95868 133 aa16.76■□□□□ 0.27
PDE4D-223ENST00000515011 POLR2KP53803 58 aaKnown RBP16.76■□□□□ 0.27
PDE4D-223ENST00000515011 STPG4Q8N801 248 aa16.76■□□□□ 0.27
PDE4D-223ENST00000515011 JMJD8Q96S16 334 aa16.76■□□□□ 0.27
PDE4D-223ENST00000515011 PROK1P58294 105 aa16.75■□□□□ 0.27
PDE4D-223ENST00000515011 COL5A1-AS1Q5SY13 56 aa16.75■□□□□ 0.27
PDE4D-223ENST00000515011 LINC00467Q9BRT7 94 aa16.75■□□□□ 0.27
PDE4D-223ENST00000515011 CUBNO60494 3623 aa16.75■□□□□ 0.27
PDE4D-223ENST00000515011 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.74■□□□□ 0.27
PDE4D-223ENST00000515011 ZNF56Q15929 161 aa16.74■□□□□ 0.27
PDE4D-223ENST00000515011 ADARB2-AS1A8MUL3 147 aa16.74■□□□□ 0.27
PDE4D-223ENST00000515011 HINT1P49773 126 aaPredicted RBP16.74■□□□□ 0.27
PDE4D-223ENST00000515011 M0QY20 66 aa16.73■□□□□ 0.27
PDE4D-223ENST00000515011 INSP01308 110 aa16.73■□□□□ 0.27
PDE4D-223ENST00000515011 FGF6P10767 208 aa16.73■□□□□ 0.27
PDE4D-223ENST00000515011 CYSRT1A8MQ03 144 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 DPM2O94777 84 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 IGKCP01834 107 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 C2orf66Q6UXQ4 117 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 NEGR1Q7Z3B1 354 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 A0A087WX48 190 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 VCYO14598 125 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 HTN1P15515 57 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 SCGB3A1Q96QR1 104 aa16.72■□□□□ 0.27
PDE4D-223ENST00000515011 TRAV12-1A0A0B4J245 112 aa16.71■□□□□ 0.27
PDE4D-223ENST00000515011 OR11H12B2RN74 326 aa16.71■□□□□ 0.27
PDE4D-223ENST00000515011 ZNF415Q09FC8 603 aa16.71■□□□□ 0.27
PDE4D-223ENST00000515011 MORN3Q6PF18 240 aaPredicted RBP16.71■□□□□ 0.27
PDE4D-223ENST00000515011 HHLA3Q9XRX5 114 aa16.71■□□□□ 0.27
PDE4D-223ENST00000515011 MTORP42345 2549 aa16.71■□□□□ 0.27
PDE4D-223ENST00000515011 OTOGQ6ZRI0 2925 aa16.71■□□□□ 0.27
PDE4D-223ENST00000515011 NF1P21359 2839 aa16.71■□□□□ 0.26
PDE4D-223ENST00000515011 TRBV27A0A0K0K1C4 114 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 SDHAF1A6NFY7 115 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 PIK3CD-AS1Q5SR53 167 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 PTH2Q96A98 100 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 MRPL35Q9NZE8 188 aaKnown RBP16.7■□□□□ 0.26
PDE4D-223ENST00000515011 G0S2P27469 103 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 C2orf91Q6ZV80 131 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 TRPT1Q86TN4 253 aaKnown RBP16.7■□□□□ 0.26
PDE4D-223ENST00000515011 STHQ8IWL8 128 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 BOD1L2Q8IYS8 172 aa16.7■□□□□ 0.26
PDE4D-223ENST00000515011 M0R2P5 195 aa16.69■□□□□ 0.26
PDE4D-223ENST00000515011 LINC01587Q99440 93 aa16.69■□□□□ 0.26
PDE4D-223ENST00000515011 KIR2DL4Q99706 377 aa16.69■□□□□ 0.26
PDE4D-223ENST00000515011 SAP30O75446 220 aa16.68■□□□□ 0.26
PDE4D-223ENST00000515011 ZFP2Q6ZN57 461 aa16.68■□□□□ 0.26
PDE4D-223ENST00000515011 LINC01549A6NIU2 74 aa16.68■□□□□ 0.26
PDE4D-223ENST00000515011 ERASQ7Z444 233 aa16.68■□□□□ 0.26
PDE4D-223ENST00000515011 EDA2RQ9HAV5 297 aa16.68■□□□□ 0.26
PDE4D-223ENST00000515011 DLEU1O43261 78 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 PRM2P04554 102 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 MPV17L2Q567V2 206 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 C11orf72Q8NBR9 251 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 CYSLTR1Q9Y271 337 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 CMC4P56277 68 aaPredicted RBP16.67■□□□□ 0.26
PDE4D-223ENST00000515011 NSUN5P1Q3KNT7 163 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 NEXN-AS1Q8NBZ9 246 aa16.67■□□□□ 0.26
PDE4D-223ENST00000515011 HIVEP2P31629 2446 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms