RNA–Protein interactions for RNA: ENST00000514660.1

NEDD9-215, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 473 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-215ENST00000514660 S100A9P06702 114 aaKnown RBP6.85□□□□□ -1.31
NEDD9-215ENST00000514660 RPL35P42766 123 aaKnown RBP6.85□□□□□ -1.31
NEDD9-215ENST00000514660 ZNF138P52744 262 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 CEBPGP53567 150 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 FLI1Q01543 452 aaPredicted RBP6.85□□□□□ -1.31
NEDD9-215ENST00000514660 Q6ZQT7 251 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 PRNTQ86SH4 94 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 Q8N3U1 123 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 TMEM75Q8N9X5 138 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 Q8TAT8 98 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 PARLQ9H300 379 aa6.85□□□□□ -1.31
NEDD9-215ENST00000514660 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
NEDD9-215ENST00000514660 TRBV20OR9-2A0A075B6H5 130 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 TMEM218A2RU14 115 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 K7EQM0 130 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 ZNF415Q09FC8 603 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 TMEM78Q5T7P6 136 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 C10orf126Q8N4M7 172 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 FMC1Q96HJ9 113 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 MLST8Q9BVC4 326 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 TP53TG3Q9ULZ0 132 aa6.84□□□□□ -1.31
NEDD9-215ENST00000514660 FAT4Q6V0I7 4981 aa6.84□□□□□ -1.32
NEDD9-215ENST00000514660 PGPEP1LA6NFU8 196 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 FBLL1A6NHQ2 334 aaKnown RBP6.83□□□□□ -1.32
NEDD9-215ENST00000514660 LTAP01374 205 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 SFTA3P0C7M3 94 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 GYPEP15421 78 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 CRISP2P16562 243 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 UBE2G1P62253 170 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 NDUFA5Q16718 116 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 ZNF674Q2M3X9 581 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 COX8CQ7Z4L0 72 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 BAGE2Q86Y30 109 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 ZFAND2AQ8N6M9 145 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 OCC1Q8TAD7 63 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 ZFP30Q9Y2G7 519 aa6.83□□□□□ -1.32
NEDD9-215ENST00000514660 IGHV3-38A0A0C4DH36 116 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 TRBV7-9A0A0J9YWB2 115 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 ZNF727A8MUV8 499 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 C9JCJ5 164 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 CRIP1P50238 77 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 ZNF80P51504 273 aaPredicted RBP6.82□□□□□ -1.32
NEDD9-215ENST00000514660 TCL1AP56279 114 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 LINC01556Q5JQF7 62 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 SAPCD1Q5SSQ6 148 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 C10orf91Q5T1B1 145 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 PRR9Q5T870 116 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 Q86TA4 180 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 TMEM183AQ8IXX5 376 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 NHLRC2Q8NBF2 726 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 ODF3Q96PU9 254 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 SMIM7Q9BQ49 75 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 PYGO2Q9BRQ0 406 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 LENEPQ9Y5L5 61 aa6.82□□□□□ -1.32
NEDD9-215ENST00000514660 KLLNB2CW77 178 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 IGHV3-30P01768 117 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 IGHV3-33P01772 117 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 IGHV3-30-3P0DP02 117 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 IGHV3-30-5P0DP03 117 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 SRIP30626 198 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 GNG4P50150 75 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 TMEM241Q24JQ0 296 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 FAM74A3Q4VXF1 159 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 ZC2HC1AQ96GY0 325 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 ZNF479Q96JC4 524 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 SDF2L1Q9HCN8 221 aa6.81□□□□□ -1.32
NEDD9-215ENST00000514660 F8W036 122 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 K7EN84 100 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 GCGP01275 180 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 GPX1P07203 203 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 RNASE4P34096 147 aaKnown RBP6.8□□□□□ -1.32
NEDD9-215ENST00000514660 LEPP41159 167 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 RPL23P62829 140 aaKnown RBP6.8□□□□□ -1.32
NEDD9-215ENST00000514660 Q6ZRU5 148 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 SEC11CQ9BY50 192 aa6.8□□□□□ -1.32
NEDD9-215ENST00000514660 PANO1I0J062 215 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 ANXA2RQ3ZCQ2 193 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 SMUG1Q53HV7 270 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 LINC01551Q86U37 167 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 NDFIP1Q9BT67 221 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 C11orf21Q9P2W6 132 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 NAT8Q9UHE5 227 aa6.79□□□□□ -1.32
NEDD9-215ENST00000514660 TMA7Q9Y2S6 64 aaKnown RBP6.79□□□□□ -1.32
NEDD9-215ENST00000514660 C7orf71A4D174 169 aa6.78□□□□□ -1.32
NEDD9-215ENST00000514660 C19orf71A6NCJ1 209 aa6.78□□□□□ -1.32
NEDD9-215ENST00000514660 FABP5P3A8MUU1 101 aa6.78□□□□□ -1.32
NEDD9-215ENST00000514660 MGST1P10620 155 aaKnown RBP6.78□□□□□ -1.32
NEDD9-215ENST00000514660 Q6AWC8 147 aa6.78□□□□□ -1.32
NEDD9-215ENST00000514660 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
NEDD9-215ENST00000514660 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
NEDD9-215ENST00000514660 CARHSP1Q9Y2V2 147 aaKnown RBP6.78□□□□□ -1.32
NEDD9-215ENST00000514660 KRBOX1C9JBD0 128 aa6.77□□□□□ -1.33
NEDD9-215ENST00000514660 SH2D1AO60880 128 aa6.77□□□□□ -1.33
NEDD9-215ENST00000514660 SLAQ13239 276 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms