RNA–Protein interactions for RNA: ENST00000511985.1

PDGFC-207, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-207ENST00000511985 PIPP12273 146 aaPredicted RBP0.58□□□□□ -2.32
PDGFC-207ENST00000511985 SPINK7P58062 85 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 C9orf116Q5BN46 136 aaPredicted RBP0.58□□□□□ -2.32
PDGFC-207ENST00000511985 MEIG1Q5JSS6 88 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 SLC48A1Q6P1K1 146 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 TSKUQ8WUA8 353 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 PLAC4Q8WY50 150 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 SPTSSAQ969W0 71 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 IFI27L1Q96BM0 104 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 LINC00208Q96KT6 92 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 PDCD10Q9BUL8 212 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 CDK12Q9NYV4 1490 aaPredicted RBP0.58□□□□□ -2.32
PDGFC-207ENST00000511985 MBD5Q9P267 1494 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 WDR7Q9Y4E6 1490 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 CTTNBP2Q8WZ74 1663 aa0.58□□□□□ -2.32
PDGFC-207ENST00000511985 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
PDGFC-207ENST00000511985 DAPK1P53355 1430 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 CFTRP13569 1480 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 TFF1P04155 84 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 HIST1H1DP16402 221 aaKnown RBP0.57□□□□□ -2.32
PDGFC-207ENST00000511985 KLKP1Q107X0 134 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 ZNF56Q15929 161 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 TMEM203Q969S6 136 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 SEC11CQ9BY50 192 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 NAA60Q9H7X0 242 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 SERP1Q9Y6X1 66 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 GPR98Q8WXG9 6306 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
PDGFC-207ENST00000511985 SMG6Q86US8 1419 aaKnown RBP0.56□□□□□ -2.32
PDGFC-207ENST00000511985 TRAV12-3A0A0B4J271 114 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 TCRBV3S1A0A5B6 114 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 IFNGP01579 166 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 CBLN1P23435 193 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 NPC2P61916 151 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 UBE2G1P62253 170 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 Q56UQ5 140 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 Q6AWC8 147 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 PPP1R1CQ8WVI7 109 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 PP6455Q8WZ26 134 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 LSM10Q969L4 123 aaKnown RBP0.56□□□□□ -2.32
PDGFC-207ENST00000511985 SCN3BQ9NY72 215 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 TANC2Q9HCD6 1990 aa0.56□□□□□ -2.32
PDGFC-207ENST00000511985 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.55□□□□□ -2.32
PDGFC-207ENST00000511985 CACNA1EQ15878 2313 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 ZNF518AQ6AHZ1 1483 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 IFT140Q96RY7 1462 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 SPAARA0A1B0GVQ0 90 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 A6NIN4 97 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 MCRIP1C9JLW8 97 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 SNCGO76070 127 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 TNFP01375 233 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 IFNA17P01571 189 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 AKAIN1P0CW23 69 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 C12orf73Q69YU5 71 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 CYP2G1PQ6ZSU1 146 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 CGREF1Q99674 301 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 RPRMQ9NS64 109 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 BET1LQ9NYM9 111 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 PLAC8Q9NZF1 115 aa0.55□□□□□ -2.32
PDGFC-207ENST00000511985 A2ML1A8K2U0 1454 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 A0A096LNT2 108 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 FXYD1O00168 92 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 CORTO00230 105 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 CCL3L1P16619 93 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 UBE2D1P51668 147 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 ELOF1P60002 83 aaKnown RBP0.54□□□□□ -2.32
PDGFC-207ENST00000511985 SSBP1Q04837 148 aaKnown RBP0.54□□□□□ -2.32
PDGFC-207ENST00000511985 WHAMMP3Q1A5X7 153 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 SPINK13Q1W4C9 94 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 RPL7L1Q6DKI1 246 aaKnown RBP0.54□□□□□ -2.32
PDGFC-207ENST00000511985 ZNF818PQ6ZRF7 136 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 C4orf33Q8N1A6 199 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 Q8N8P6 123 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 C10orf82Q8WW14 230 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 TMEM14BQ9NUH8 114 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 COA4Q9NYJ1 87 aa0.54□□□□□ -2.32
PDGFC-207ENST00000511985 NINQ8N4C6 2090 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 PEG3Q9GZU2 1588 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 ANK1P16157 1881 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 A0A087WTM6 91 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 PIGBOS1A0A0B4J2F0 54 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 TRBV10-3A0A0K0K1G6 114 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 CLPSL1A2RUU4 121 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 RBAKDNA6NC62 111 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 MIF4GDA9UHW6 222 aaKnown RBP0.53□□□□□ -2.32
PDGFC-207ENST00000511985 F6UZH7 168 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 APOC4-APOC2K7ER74 178 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 APOC2P02655 101 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 RPL37P61927 97 aaKnown RBP0.53□□□□□ -2.32
PDGFC-207ENST00000511985 CCL8P80075 99 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 MRPS10P82664 201 aaKnown RBP0.53□□□□□ -2.32
PDGFC-207ENST00000511985 C20orf197Q8N268 126 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 COX7B2Q8TF08 81 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 PPP3R2Q96LZ3 170 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 SPANXDQ9BXN6 97 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 GNG8Q9UK08 70 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 IER3IP1Q9Y5U9 82 aa0.53□□□□□ -2.32
PDGFC-207ENST00000511985 BCORL1Q5H9F3 1711 aa0.52□□□□□ -2.33
PDGFC-207ENST00000511985 CASZ1Q86V15 1759 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms