RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 CIDEAO60543 219 aa11.12□□□□□ -0.63
SIM1-204ENST00000511871 CXCL1P09341 107 aa11.12□□□□□ -0.63
SIM1-204ENST00000511871 GNG4P50150 75 aa11.12□□□□□ -0.63
SIM1-204ENST00000511871 RPL19P84098 196 aaKnown RBP11.12□□□□□ -0.63
SIM1-204ENST00000511871 ZNRF2Q8NHG8 242 aa11.12□□□□□ -0.63
SIM1-204ENST00000511871 IGLV2-18A0A075B6J9 118 aa11.11□□□□□ -0.63
SIM1-204ENST00000511871 GATA1P15976 413 aaPredicted RBP11.11□□□□□ -0.63
SIM1-204ENST00000511871 MRPL23Q16540 153 aaKnown RBP11.11□□□□□ -0.63
SIM1-204ENST00000511871 TMEM241Q24JQ0 296 aa11.11□□□□□ -0.63
SIM1-204ENST00000511871 M0R2N4 97 aa11.1□□□□□ -0.63
SIM1-204ENST00000511871 MED14OSP0DP75 135 aa11.1□□□□□ -0.63
SIM1-204ENST00000511871 MGST1P10620 155 aaKnown RBP11.1□□□□□ -0.63
SIM1-204ENST00000511871 DMRTA1Q5VZB9 504 aa11.1□□□□□ -0.63
SIM1-204ENST00000511871 TGIF2-C20orf24A0A0A6YYL0 155 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 PCP4L1A6NKN8 68 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 A8MWV9 139 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 K7EQD1 137 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 GYPEP15421 78 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 CTAG1AP78358 180 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 Q6ZR54 194 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 SYT8Q8NBV8 401 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 PARLQ9H300 379 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 IGHV3-73A0A0B4J1V6 119 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 UPK3BQ9BT76 320 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 JPT2Q9H910 190 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 MRPS16Q9Y3D3 137 aaKnown RBP11.09□□□□□ -0.63
SIM1-204ENST00000511871 DNAH10Q8IVF4 4471 aa11.09□□□□□ -0.63
SIM1-204ENST00000511871 LOC100131303A0A0U1RQF7 123 aa11.08□□□□□ -0.64
SIM1-204ENST00000511871 ZFP2Q6ZN57 461 aa11.08□□□□□ -0.64
SIM1-204ENST00000511871 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
SIM1-204ENST00000511871 TRBV6-4A0A1B0GX49 114 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 SRIP30626 198 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 NEGR1Q7Z3B1 354 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 ANAPC16Q96DE5 110 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 DAZAP1Q96EP5 407 aaKnown RBP11.07□□□□□ -0.64
SIM1-204ENST00000511871 SSBP4Q9BWG4 385 aaPredicted RBP11.07□□□□□ -0.64
SIM1-204ENST00000511871 SAMD10Q9BYL1 202 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 URGCP-MRPS24S4R325 110 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 FRAS1Q86XX4 4008 aa11.07□□□□□ -0.64
SIM1-204ENST00000511871 M0R381 172 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 SNAI2O43623 268 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BKO60814 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BJP06899 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BOP23527 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BBP33778 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BDP58876 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BCP62807 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 RPL23P62829 140 aaKnown RBP11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST2H2BEQ16778 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.06□□□□□ -0.64
SIM1-204ENST00000511871 LYPD5Q6UWN5 251 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BHQ93079 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BNQ99877 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 HIST1H2BMQ99879 126 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 Q9H8V8 135 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 PHOX2AO14813 284 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 RHOHQ15669 191 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 Q6ZSN1 163 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 OCC1Q8TAD7 63 aa11.06□□□□□ -0.64
SIM1-204ENST00000511871 NBDYA0A0U1RRE5 68 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 NXPH4O95158 308 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 TRGC2P03986 189 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 OR5AL1P0C617 328 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 S100PP25815 95 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 NDUFA6P56556 154 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 RPS20P60866 119 aaKnown RBP11.05□□□□□ -0.64
SIM1-204ENST00000511871 ADIRFQ15847 76 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 OR2D3Q8NGH3 330 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 PRADC1Q9BSG0 188 aa11.05□□□□□ -0.64
SIM1-204ENST00000511871 K7EN84 100 aa11.04□□□□□ -0.64
SIM1-204ENST00000511871 RHODO00212 210 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 P01737 135 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 CRYGDP07320 174 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 IGLC6P0CF74 106 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 GZMBP10144 247 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 S100A2P29034 98 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 NUDT10Q8NFP7 164 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 BTF3L4Q96K17 158 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 NIT2Q9NQR4 276 aa11.03□□□□□ -0.64
SIM1-204ENST00000511871 A0A087WWL8 130 aa11.02□□□□□ -0.64
SIM1-204ENST00000511871 IFITM10A6NMD0 228 aa11.02□□□□□ -0.64
SIM1-204ENST00000511871 PPP1R2P9O14990 202 aa11.02□□□□□ -0.64
SIM1-204ENST00000511871 FAM74A4Q5TZK3 123 aa11.02□□□□□ -0.64
SIM1-204ENST00000511871 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.64
SIM1-204ENST00000511871 IMMP2LQ96T52 175 aa11.02□□□□□ -0.64
SIM1-204ENST00000511871 MUC21A0A0G2JKD1 596 aa11.02□□□□□ -0.65
SIM1-204ENST00000511871 MUC21A0A140T8X8 626 aa11.02□□□□□ -0.65
SIM1-204ENST00000511871 RTL8CO15255 209 aa11.02□□□□□ -0.65
SIM1-204ENST00000511871 TRGC1P0CF51 173 aa11.02□□□□□ -0.65
SIM1-204ENST00000511871 HIST3H2BBQ8N257 126 aa11.02□□□□□ -0.65
SIM1-204ENST00000511871 FRZBQ92765 325 aa11.02□□□□□ -0.65
SIM1-204ENST00000511871 SPANXN1Q5VSR9 72 aa11.01□□□□□ -0.65
SIM1-204ENST00000511871 C14orf178Q8N769 122 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms