RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 LINC00526Q96FQ7 95 aa1.77□□□□□ -2.13
USO1-202ENST00000508454 MRPL35Q9NZE8 188 aaKnown RBP1.77□□□□□ -2.13
USO1-202ENST00000508454 IER3IP1Q9Y5U9 82 aa1.77□□□□□ -2.13
USO1-202ENST00000508454 BCORL1Q5H9F3 1711 aa1.77□□□□□ -2.13
USO1-202ENST00000508454 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
USO1-202ENST00000508454 APOC4-APOC2K7ER74 178 aa1.76□□□□□ -2.13
USO1-202ENST00000508454 APOC2P02655 101 aa1.76□□□□□ -2.13
USO1-202ENST00000508454 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
USO1-202ENST00000508454 C10orf82Q8WW14 230 aa1.76□□□□□ -2.13
USO1-202ENST00000508454 CUL7Q14999 1698 aa1.76□□□□□ -2.13
USO1-202ENST00000508454 MYOM2P54296 1465 aa1.75□□□□□ -2.13
USO1-202ENST00000508454 IGKV2-40A0A087WW87 121 aaPredicted RBP1.75□□□□□ -2.13
USO1-202ENST00000508454 J3QKU1 62 aa1.75□□□□□ -2.13
USO1-202ENST00000508454 IGKV2D-40P01614 121 aaPredicted RBP1.75□□□□□ -2.13
USO1-202ENST00000508454 RBM3P98179 157 aaKnown RBP1.75□□□□□ -2.13
USO1-202ENST00000508454 DEFB132Q7Z7B7 95 aa1.75□□□□□ -2.13
USO1-202ENST00000508454 PPP3R2Q96LZ3 170 aa1.75□□□□□ -2.13
USO1-202ENST00000508454 DSCR8Q96T75 97 aa1.75□□□□□ -2.13
USO1-202ENST00000508454 CACNA1BQ00975 2339 aa1.75□□□□□ -2.13
USO1-202ENST00000508454 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
USO1-202ENST00000508454 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
USO1-202ENST00000508454 HIGD1CA8MV81 97 aa1.74□□□□□ -2.13
USO1-202ENST00000508454 SNRNP200O75643 2136 aaKnown RBP1.74□□□□□ -2.13
USO1-202ENST00000508454 PZPP20742 1482 aa1.74□□□□□ -2.13
USO1-202ENST00000508454 TECTAO75443 2155 aa1.74□□□□□ -2.13
USO1-202ENST00000508454 LAMB1P07942 1786 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 PRB1P04280 392 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 CBLN1P23435 193 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 C9orf153Q5TBE3 101 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 SPTSSBQ8NFR3 76 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 LINC00208Q96KT6 92 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 MRPL57Q9BQC6 102 aaKnown RBP1.73□□□□□ -2.13
USO1-202ENST00000508454 RPRMQ9NS64 109 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 E9PCH4 1651 aa1.73□□□□□ -2.13
USO1-202ENST00000508454 OTOGLQ3ZCN5 2332 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 TCRBV3S1A0A5B6 114 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 SMIM6P0DI80 62 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 HSD52Q0P140 79 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 FXYD3Q14802 87 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 NDUFA11Q86Y39 141 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 AMELYQ99218 206 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 RBBP6Q7Z6E9 1792 aaKnown RBP1.72□□□□□ -2.13
USO1-202ENST00000508454 ESPL1Q14674 2120 aa1.72□□□□□ -2.13
USO1-202ENST00000508454 ABCA4P78363 2273 aa1.71□□□□□ -2.13
USO1-202ENST00000508454 A6NIN4 97 aa1.71□□□□□ -2.14
USO1-202ENST00000508454 LYNX1P0DP58 116 aa1.71□□□□□ -2.14
USO1-202ENST00000508454 RPL7L1Q6DKI1 246 aaKnown RBP1.71□□□□□ -2.14
USO1-202ENST00000508454 C5orf56Q8N8D9 126 aa1.71□□□□□ -2.14
USO1-202ENST00000508454 DLEC1Q9Y238 1755 aa1.7□□□□□ -2.14
USO1-202ENST00000508454 DEFB119Q8N690 84 aa1.7□□□□□ -2.14
USO1-202ENST00000508454 SPTBP11277 2137 aa1.7□□□□□ -2.14
USO1-202ENST00000508454 ROBO1Q9Y6N7 1651 aa1.7□□□□□ -2.14
USO1-202ENST00000508454 CDK12Q9NYV4 1490 aaPredicted RBP1.69□□□□□ -2.14
USO1-202ENST00000508454 FLG2Q5D862 2391 aaPredicted RBP1.69□□□□□ -2.14
USO1-202ENST00000508454 XAF1Q6GPH4 301 aa1.69□□□□□ -2.14
USO1-202ENST00000508454 DLG5Q8TDM6 1919 aa1.69□□□□□ -2.14
USO1-202ENST00000508454 KTN1Q86UP2 1357 aaKnown RBP1.69□□□□□ -2.14
USO1-202ENST00000508454 KIAA0100Q14667 2235 aaKnown RBP1.68□□□□□ -2.14
USO1-202ENST00000508454 TMEM218A2RU14 115 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 CLPSL1A2RUU4 121 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 HCG22E2RYF7 251 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 IFITM1P13164 125 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 EFNA4P52798 201 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 C12orf73Q69YU5 71 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 GTF2H5Q6ZYL4 71 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 RP1L1Q8IWN7 2480 aaPredicted RBP1.68□□□□□ -2.14
USO1-202ENST00000508454 IFT140Q96RY7 1462 aa1.68□□□□□ -2.14
USO1-202ENST00000508454 DAPK1P53355 1430 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 TRAV30A0A087WSZ9 112 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 IFNA17P01571 189 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 SPINK8P0C7L1 97 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 CCL19Q99731 98 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 DPH3P1Q9H4G8 78 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 AFDNP55196 1824 aaKnown RBP1.67□□□□□ -2.14
USO1-202ENST00000508454 CCNB3Q8WWL7 1395 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 SPAG17Q6Q759 2223 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 RREB1Q92766 1687 aa1.67□□□□□ -2.14
USO1-202ENST00000508454 TRBV10-3A0A0K0K1G6 114 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 NCR3O14931 201 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 UBE2D1P51668 147 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 C5orf38Q86SI9 138 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 SVBPQ8N300 66 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 SPANXDQ9BXN6 97 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 LINC00474Q9P2X8 69 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 MRC2Q9UBG0 1479 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 ZNF142P52746 1687 aaPredicted RBP1.66□□□□□ -2.14
USO1-202ENST00000508454 ZFYVE16Q7Z3T8 1539 aa1.66□□□□□ -2.14
USO1-202ENST00000508454 TEX49A0A1B0GTD5 131 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 ELOF1P60002 83 aaKnown RBP1.65□□□□□ -2.15
USO1-202ENST00000508454 CCL8P80075 99 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 ZNF56Q15929 161 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 NCMAPQ5T1S8 102 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 Q6ZSA8 131 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 CYP2G1PQ6ZSU1 146 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 Q86TA4 180 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 C8orf59Q8N0T1 100 aaPredicted RBP1.65□□□□□ -2.15
USO1-202ENST00000508454 C20orf197Q8N268 126 aa1.65□□□□□ -2.15
USO1-202ENST00000508454 FCGBPQ9Y6R7 5405 aaPredicted RBP1.65□□□□□ -2.15
USO1-202ENST00000508454 ASCC3Q8N3C0 2202 aaKnown RBP1.64□□□□□ -2.15
USO1-202ENST00000508454 CCL3L1P16619 93 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms