RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MYH9P35579 1960 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 CASZ1Q86V15 1759 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 FXYD6P3P58550 94 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 ZNF56Q15929 161 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 WHAMMP3Q1A5X7 153 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 C9orf116Q5BN46 136 aaPredicted RBP1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 SPTSSBQ8NFR3 76 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 AGPAT4-IT1Q9H0P7 198 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 BET1LQ9NYM9 111 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 ADGRB1O14514 1584 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 MYH7P12883 1935 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 ATG2AQ2TAZ0 1938 aa1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 SMG6Q86US8 1419 aaKnown RBP1.32□□□□□ -2.2
TRAPPC13-209ENST00000508304 HELZ2Q9BYK8 2649 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 ROS1P08922 2347 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 NBDYA0A0U1RRE5 68 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 MIF4GDA9UHW6 222 aaKnown RBP1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 CBLN1P23435 193 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 FAM74A4Q5TZK3 123 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 C5orf56Q8N8D9 126 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 C2orf88Q9BSF0 95 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 SERP1Q9Y6X1 66 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 CFTRP13569 1480 aa1.31□□□□□ -2.2
TRAPPC13-209ENST00000508304 S100A1P23297 94 aa1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 MRPS10P82664 201 aaKnown RBP1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 KLKP1Q107X0 134 aa1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 C12orf73Q69YU5 71 aa1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 DEFB132Q7Z7B7 95 aa1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 DSCR8Q96T75 97 aa1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 BLMP54132 1417 aaPredicted RBP1.3□□□□□ -2.2
TRAPPC13-209ENST00000508304 PHLPP1O60346 1717 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 TRBV10-3A0A0K0K1G6 114 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 RBAKDNA6NC62 111 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 LINC00587B1AMM8 73 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 MCRIP1C9JLW8 97 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 F6UZH7 168 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 APOC4-APOC2K7ER74 178 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 IFNGP01579 166 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 APOC2P02655 101 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 SPINT3P49223 89 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 SPINK13Q1W4C9 94 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 Q56UQ5 140 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 C10orf82Q8WW14 230 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 PP6455Q8WZ26 134 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 TMEM14BQ9NUH8 114 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 NCOA3Q9Y6Q9 1424 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 PTPRMP28827 1452 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 ZNF518AQ6AHZ1 1483 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 EIF4G3O43432 1585 aaKnown RBP1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 PEG3Q9GZU2 1588 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 RREB1Q92766 1687 aa1.29□□□□□ -2.2
TRAPPC13-209ENST00000508304 CNTRLQ7Z7A1 2325 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 TPPP2P59282 170 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 NPC2P61916 151 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 BTG2P78543 158 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 Q6AWC8 147 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 KRTAP5-10Q6L8G5 202 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 Q8N6K4 173 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 SCN3BQ9NY72 215 aa1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 KTN1Q86UP2 1357 aaKnown RBP1.28□□□□□ -2.2
TRAPPC13-209ENST00000508304 KIAA0100Q14667 2235 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 CITO14578 2027 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 PLXNA2O75051 1894 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 DLEC1Q9Y238 1755 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 MBD5Q9P267 1494 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 LOC100130705A0A1B0GUX0 176 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 RBM3P98179 157 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 SSBP1Q04837 148 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 CATR1Q13166 79 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 MRPL54Q6P161 138 aaKnown RBP1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 C4orf33Q8N1A6 199 aa1.27□□□□□ -2.21
TRAPPC13-209ENST00000508304 GNG4P50150 75 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 C10orf99Q6UWK7 81 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 COX7B2Q8TF08 81 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 PLAC4Q8WY50 150 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 PPP3R2Q96LZ3 170 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 AQP10Q96PS8 301 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 NALCNQ8IZF0 1738 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 ZDBF2Q9HCK1 2354 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 ABCA4P78363 2273 aa1.26□□□□□ -2.21
TRAPPC13-209ENST00000508304 AKAP11Q9UKA4 1901 aa1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 AFDNP55196 1824 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 CORTO00230 105 aa1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 SMIM6P0DI80 62 aa1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 CCL3L1P16619 93 aa1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 LSM10Q969L4 123 aaKnown RBP1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 BCORL1Q5H9F3 1711 aa1.25□□□□□ -2.21
TRAPPC13-209ENST00000508304 TRAV13-2A0A0B4J235 113 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 SPAARA0A1B0GVQ0 90 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 F2Z2F3 143 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 KRTAP10-4P60372 401 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 PPP3R1P63098 170 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 C9orf153Q5TBE3 101 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 C8orf59Q8N0T1 100 aaPredicted RBP1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 SPANXDQ9BXN6 97 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 V9GYV3 84 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 FOCADQ5VW36 1801 aa1.24□□□□□ -2.21
TRAPPC13-209ENST00000508304 LY6G6CO95867 125 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 S100PP25815 95 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms