RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 C14orf178Q8N769 122 aaPredicted RBP5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 LINC01587Q99440 93 aa5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 LINC00467Q9BRT7 94 aa5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 MCRIP2Q9BUT9 160 aaKnown RBP5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 NIT2Q9NQR4 276 aa5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 GSN-AS1Q9NRJ2 163 aa5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 MDFICQ9P1T7 246 aa5.91□□□□□ -1.46
PDZRN3-212ENST00000498048 IGHV3OR16-12A0A075B7B8 117 aa5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 GATA1P15976 413 aaPredicted RBP5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 IFI27P40305 119 aaPredicted RBP5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 NRACQ8N912 160 aa5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 SPATA3Q8NHX4 192 aa5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 C1QTNF4Q9BXJ3 329 aa5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 NXT2Q9NPJ8 142 aaKnown RBP5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 C19orf73Q9NVV2 129 aa5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 GOLT1BQ9Y3E0 138 aa5.9□□□□□ -1.46
PDZRN3-212ENST00000498048 TENM1Q9UKZ4 2725 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 A0A087WWL8 130 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 GAS8-AS1O95177 125 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 LEPROTL1O95214 131 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 SCGB1D1O95968 90 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 HBDP02042 147 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 MORN3Q6PF18 240 aaPredicted RBP5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 SMIM2Q9BVW6 85 aa5.89□□□□□ -1.47
PDZRN3-212ENST00000498048 MAST4O15021 2626 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 M0R2P5 195 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 C3orf79P0CE67 100 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 S100A12P80511 92 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 ZNF876PQ49A33 203 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 C1orf158Q8N1D5 194 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 DEFB125Q8N687 156 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 Q8N8P6 123 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 C11orf72Q8NBR9 251 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 TMEM263Q8WUH6 116 aaKnown RBP5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 RPL39LQ96EH5 51 aaKnown RBP5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 JPT2Q9H910 190 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 HSPB8Q9UJY1 196 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 KIF25-AS1Q9Y6Z4 181 aa5.88□□□□□ -1.47
PDZRN3-212ENST00000498048 C20orf202A1L168 122 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 PCP4L1A6NKN8 68 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 F5H697 171 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 PPP1R17O96001 155 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 IGLL1P15814 213 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 SUMO2P61956 95 aaKnown RBP5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 C12orf54Q6X4T0 127 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 POM121L12Q8N7R1 296 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 IL17DQ8TAD2 202 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 RASL10AQ92737 203 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 C16orf74Q96GX8 76 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 SPXQ9BT56 116 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 ZNF747Q9BV97 191 aa5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 MRPL16Q9NX20 251 aaKnown RBP5.87□□□□□ -1.47
PDZRN3-212ENST00000498048 NOTCH3Q9UM47 2321 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 A0A096LNJ9 63 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 A8MWV9 139 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 RHODO00212 210 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 PRM2P04554 102 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 BTF3P20290 206 aaKnown RBP5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 PIK3CD-AS1Q5SR53 167 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 LINC00173Q6ZV60 143 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 PRIMA1Q86XR5 153 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 RNASE8Q8TDE3 154 aaKnown RBP5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 C20orf78Q9BR46 151 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 TMEM70Q9BUB7 260 aa5.86□□□□□ -1.47
PDZRN3-212ENST00000498048 IGLV2-18A0A075B6J9 118 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 LINC01546A6NGU7 62 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 PRSS47A8MTI9 375 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 TSTD3H0UI37 97 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 H0Y8G0 127 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 H7C1H1 209 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 GIG44P09565 113 aaPredicted RBP5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 LINC00315P59091 139 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 TEX43Q6ZNM6 134 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 Q8N976 141 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 TMEM158Q8WZ71 300 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 PTH2Q96A98 100 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 NDUFAF3Q9BU61 184 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 VAMP8Q9BV40 100 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 MAP1LC3CQ9BXW4 147 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 ST20Q9HBF5 79 aa5.85□□□□□ -1.47
PDZRN3-212ENST00000498048 TRGV1A0A0A0MS02 117 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 IGHV3-73A0A0B4J1V6 119 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 KIR2DL5BA0A0G2JN68 375 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 KIR2DL5BA0A0G2JPC4 375 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 SYS1-DBNDD2H3BUS1 97 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 TCAPO15273 167 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 CRYGDP07320 174 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 AZU1P20160 251 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 FCER1GP30273 86 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 LAGE3Q14657 143 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 RRN3P1Q2M238 152 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 ORMDL2Q53FV1 153 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 ZNF705AQ6ZN79 300 aaPredicted RBP5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 KIR2DL5AQ8N109 375 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 CSTL1Q9H114 145 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 EDA2RQ9HAV5 297 aa5.84□□□□□ -1.47
PDZRN3-212ENST00000498048 VWFP04275 2813 aa5.84□□□□□ -1.48
PDZRN3-212ENST00000498048 K7EMI3 77 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms