RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 SFRP2Q96HF1 295 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 TIMM17AQ99595 171 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 MGST2Q99735 147 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 TMEM147Q9BVK8 224 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 SDF2L1Q9HCN8 221 aa4.07□□□□□ -1.76
TMEM39A-212ENST00000497993 A0A0J9YWU9 116 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 IGSF23A1L1A6 192 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 C8orf87E5RJ46 101 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 HYPMO75409 117 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 IGLC2P0DOY2 106 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 S100A11P31949 105 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 CRYBA4P53673 196 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 SLC38A11Q08AI6 406 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 ACOT6Q3I5F7 207 aaPredicted RBP4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 CENPWQ5EE01 88 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 PSMG4Q5JS54 123 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 LCN15Q6UWW0 184 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 OR8I2Q8N0Y5 310 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 C1orf158Q8N1D5 194 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 OR11H2Q8NH07 326 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 SLC50A1Q9BRV3 221 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 PBDC1Q9BVG4 233 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 SAMD10Q9BYL1 202 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 HIGD1AQ9Y241 93 aa4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 YTHDF2Q9Y5A9 579 aaKnown RBP4.06□□□□□ -1.76
TMEM39A-212ENST00000497993 HYDINQ4G0P3 5121 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 IGKV3-7A0A075B6H7 116 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 TMEM189A5PLL7 270 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 FAM24AA6NFZ4 105 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 KNCNA6PVL3 124 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 C11orf94C9JXX5 98 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 IFNA1P01562 189 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 CXCL3P19876 107 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 GATA2P23769 480 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 PDE6HQ13956 83 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 GDF5OSQ5U4N7 250 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 CEMP1Q6PRD7 247 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 ORAOV1Q8WV07 137 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 BORCS7Q96B45 105 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 LINC00479Q96M42 142 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 ODF3Q96PU9 254 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 PFDN5Q99471 154 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 SCRT1Q9BWW7 348 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 ZNF331Q9NQX6 463 aaPredicted RBP4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 RPRMQ9NS64 109 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 UQCC1Q9NVA1 299 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 GSKIPQ9P0R6 139 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 TMEM14CQ9P0S9 112 aa4.05□□□□□ -1.76
TMEM39A-212ENST00000497993 A0A1B0GV50 99 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 G3V3Q6 166 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 MPC2O95563 127 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 ATP5G1P05496 136 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 CRISP2P16562 243 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 ORM2P19652 201 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 ERCC8Q13216 396 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 NDUFA5Q16718 116 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 NEGR1Q7Z3B1 354 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 BPIFA4PQ86YQ2 179 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 LINC00337Q8N6G1 96 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 PPP1R1CQ8WVI7 109 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 FAM104AQ969W3 186 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 FAM167A-AS1Q96KT0 104 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 YPEL4Q96NS1 127 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 ANAPC13Q9BS18 74 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 NPCDR1Q9BY65 106 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 BIN3Q9NQY0 253 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 KCNIP2Q9NS61 270 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 SLC39A9Q9NUM3 307 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 OR5AC2Q9NZP5 309 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 PXMP4Q9Y6I8 212 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 FRAS1Q86XX4 4008 aa4.04□□□□□ -1.76
TMEM39A-212ENST00000497993 NDUFAF8A1L188 74 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 PLAC8L1A1L4L8 177 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 KRBOX1C9JBD0 128 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 NDUFC2-KCTD14E9PQ53 114 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 COX7A2P2O60397 106 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 CST7O76096 145 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 SIX6O95475 246 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 SCGB1C2P0DMR2 95 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 RRAS2P62070 204 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 PSG9Q00887 426 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 Q1RN00 199 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 LGALS9CQ6DKI2 356 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 ZFAND6Q6FIF0 208 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 EBLN2Q6P2I7 272 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 LINC00305Q7Z4B0 112 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 TMEM256Q8N2U0 113 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 OR8A1Q8NGG7 326 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 SCGB1C1Q8TD33 95 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 TMEM101Q96IK0 257 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 FAM210BQ96KR6 192 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 IGF2BP2-AS1Q96M15 143 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 LINC01587Q99440 93 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 MRPL32Q9BYC8 188 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 WDR61Q9GZS3 305 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 EIF5A2Q9GZV4 153 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 RBM12B-AS1Q9P1G2 102 aa4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 CARHSP1Q9Y2V2 147 aaKnown RBP4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
TMEM39A-212ENST00000497993 HSPB11Q9Y547 144 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms