RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 POM121L12Q8N7R1 296 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 GSN-AS1Q9NRJ2 163 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 AP5S1Q9NUS5 200 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
HLA-A-208ENST00000496081 IGHV3OR16-12A0A075B7B8 117 aa11.9□□□□□ -0.5
HLA-A-208ENST00000496081 SMIM17P0DL12 118 aa11.9□□□□□ -0.5
HLA-A-208ENST00000496081 ZNF415Q09FC8 603 aa11.9□□□□□ -0.5
HLA-A-208ENST00000496081 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
HLA-A-208ENST00000496081 MAP1LC3AQ9H492 121 aa11.9□□□□□ -0.5
HLA-A-208ENST00000496081 A0A087WWL8 130 aa11.9□□□□□ -0.51
HLA-A-208ENST00000496081 AZU1P20160 251 aa11.9□□□□□ -0.51
HLA-A-208ENST00000496081 MORN3Q6PF18 240 aaPredicted RBP11.9□□□□□ -0.51
HLA-A-208ENST00000496081 C3orf56Q8N813 242 aa11.9□□□□□ -0.51
HLA-A-208ENST00000496081 NIT2Q9NQR4 276 aa11.9□□□□□ -0.51
HLA-A-208ENST00000496081 COL6A5A8TX70 2615 aa11.89□□□□□ -0.51
HLA-A-208ENST00000496081 PRSS47A8MTI9 375 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 WIPF1O43516 503 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 CRYGDP07320 174 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 C12orf54Q6X4T0 127 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 CSNK1G2-AS1Q8NCQ2 148 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 RASL10AQ92737 203 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 C1QTNF4Q9BXJ3 329 aa11.88□□□□□ -0.51
HLA-A-208ENST00000496081 M0R2P5 195 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 STAB1Q9NY15 2570 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 IGLV2-18A0A075B6J9 118 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 KRTDAPP60985 99 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 FAM74A4Q5TZK3 123 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 PTH2Q96A98 100 aa11.87□□□□□ -0.51
HLA-A-208ENST00000496081 RPL39LQ96EH5 51 aaKnown RBP11.87□□□□□ -0.51
HLA-A-208ENST00000496081 NXT2Q9NPJ8 142 aaKnown RBP11.87□□□□□ -0.51
HLA-A-208ENST00000496081 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
HLA-A-208ENST00000496081 PCP4L1A6NKN8 68 aa11.86□□□□□ -0.51
HLA-A-208ENST00000496081 SUMO4Q6EEV6 95 aa11.86□□□□□ -0.51
HLA-A-208ENST00000496081 SPXQ9BT56 116 aa11.86□□□□□ -0.51
HLA-A-208ENST00000496081 GOLT1BQ9Y3E0 138 aa11.86□□□□□ -0.51
HLA-A-208ENST00000496081 A0A096LNJ9 63 aa11.85□□□□□ -0.51
HLA-A-208ENST00000496081 SCGB1D1O95968 90 aa11.85□□□□□ -0.51
HLA-A-208ENST00000496081 C3orf79P0CE67 100 aa11.85□□□□□ -0.51
HLA-A-208ENST00000496081 PIK3CD-AS1Q5SR53 167 aa11.85□□□□□ -0.51
HLA-A-208ENST00000496081 Q8N8P6 123 aa11.85□□□□□ -0.51
HLA-A-208ENST00000496081 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
HLA-A-208ENST00000496081 F5H697 171 aa11.84□□□□□ -0.51
HLA-A-208ENST00000496081 LEPROTL1O95214 131 aa11.84□□□□□ -0.51
HLA-A-208ENST00000496081 IL17DQ8TAD2 202 aa11.84□□□□□ -0.51
HLA-A-208ENST00000496081 CSTL1Q9H114 145 aa11.84□□□□□ -0.51
HLA-A-208ENST00000496081 ZNF705AQ6ZN79 300 aaPredicted RBP11.84□□□□□ -0.51
HLA-A-208ENST00000496081 LINC00173Q6ZV60 143 aa11.84□□□□□ -0.51
HLA-A-208ENST00000496081 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
HLA-A-208ENST00000496081 C20orf78Q9BR46 151 aa11.84□□□□□ -0.51
HLA-A-208ENST00000496081 PPP1R17O96001 155 aa11.83□□□□□ -0.52
HLA-A-208ENST00000496081 SUMO2P61956 95 aaKnown RBP11.83□□□□□ -0.52
HLA-A-208ENST00000496081 ZNF56Q15929 161 aa11.83□□□□□ -0.52
HLA-A-208ENST00000496081 Q8N976 141 aa11.83□□□□□ -0.52
HLA-A-208ENST00000496081 SMIM2Q9BVW6 85 aa11.83□□□□□ -0.52
HLA-A-208ENST00000496081 MRPL16Q9NX20 251 aaKnown RBP11.83□□□□□ -0.52
HLA-A-208ENST00000496081 A8MWV9 139 aa11.82□□□□□ -0.52
HLA-A-208ENST00000496081 NACAE9PAV3 2078 aa11.81□□□□□ -0.52
HLA-A-208ENST00000496081 M0QY20 66 aa11.81□□□□□ -0.52
HLA-A-208ENST00000496081 BTF3P20290 206 aaKnown RBP11.81□□□□□ -0.52
HLA-A-208ENST00000496081 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
HLA-A-208ENST00000496081 TCAPO15273 167 aa11.8□□□□□ -0.52
HLA-A-208ENST00000496081 HBDP02042 147 aa11.8□□□□□ -0.52
HLA-A-208ENST00000496081 KRTAP21-3Q3LHN1 58 aa11.8□□□□□ -0.52
HLA-A-208ENST00000496081 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
HLA-A-208ENST00000496081 HSPB8Q9UJY1 196 aa11.8□□□□□ -0.52
HLA-A-208ENST00000496081 IGHV3-73A0A0B4J1V6 119 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 PLAC8L1A1L4L8 177 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 OXLD1Q5BKU9 147 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 C16orf74Q96GX8 76 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 TMEM70Q9BUB7 260 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 FCER1GP30273 86 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 LAGE3Q14657 143 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 NDUFAF3Q9BU61 184 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 ST20Q9HBF5 79 aa11.79□□□□□ -0.52
HLA-A-208ENST00000496081 TRGV1A0A0A0MS02 117 aa11.78□□□□□ -0.52
HLA-A-208ENST00000496081 TRBV6-5A0A0K0K1A5 114 aa11.78□□□□□ -0.52
HLA-A-208ENST00000496081 RS1O15537 224 aa11.78□□□□□ -0.52
HLA-A-208ENST00000496081 DAZ2Q13117 558 aaKnown RBP11.78□□□□□ -0.52
HLA-A-208ENST00000496081 SPATA12Q7Z6I5 190 aa11.78□□□□□ -0.52
HLA-A-208ENST00000496081 SYS1-DBNDD2H3BUS1 97 aa11.77□□□□□ -0.52
HLA-A-208ENST00000496081 POLR2KP53803 58 aaKnown RBP11.77□□□□□ -0.52
HLA-A-208ENST00000496081 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.52
HLA-A-208ENST00000496081 MAP1LC3CQ9BXW4 147 aa11.77□□□□□ -0.52
HLA-A-208ENST00000496081 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.52
HLA-A-208ENST00000496081 Q6ZTI0 123 aa11.77□□□□□ -0.53
HLA-A-208ENST00000496081 EDA2RQ9HAV5 297 aa11.77□□□□□ -0.53
HLA-A-208ENST00000496081 KIR2DL5BA0A0G2JN68 375 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 KIR2DL5BA0A0G2JPC4 375 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 SDHAF1A6NFY7 115 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 LGALS9BQ3B8N2 356 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 TEX43Q6ZNM6 134 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 Q6ZSN1 163 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 KIR2DL5AQ8N109 375 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 KIR2DL5BQ8NHK3 375 aa11.76□□□□□ -0.53
HLA-A-208ENST00000496081 K7EMI3 77 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms