RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 Q6ZS92 163 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 KCNRGQ8N5I3 272 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 SNRNP25Q9BV90 132 aaKnown RBP0.82□□□□□ -2.28
COPS3-211ENST00000495640 TMEM242Q9NWH2 141 aa0.82□□□□□ -2.28
COPS3-211ENST00000495640 ROCK2O75116 1388 aaKnown RBP0.82□□□□□ -2.28
COPS3-211ENST00000495640 BCORL1Q5H9F3 1711 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 NALCNQ8IZF0 1738 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 PARP14Q460N5 1801 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 TEX49A0A1B0GTD5 131 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 DLEU1O43261 78 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 HIST1H1DP16402 221 aaKnown RBP0.81□□□□□ -2.28
COPS3-211ENST00000495640 C9orf116Q5BN46 136 aaPredicted RBP0.81□□□□□ -2.28
COPS3-211ENST00000495640 SLC48A1Q6P1K1 146 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 TMEM141Q96I45 108 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 SEC11CQ9BY50 192 aa0.81□□□□□ -2.28
COPS3-211ENST00000495640 TRAV12-3A0A0B4J271 114 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 APODP05090 189 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 IL5P05113 134 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 BTG2P78543 158 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 KLKP1Q107X0 134 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 MEIG1Q5JSS6 88 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 LSM10Q969L4 123 aaKnown RBP0.8□□□□□ -2.28
COPS3-211ENST00000495640 AGPAT4-IT1Q9H0P7 198 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 NRXN2Q9P2S2 1712 aa0.8□□□□□ -2.28
COPS3-211ENST00000495640 PEG3Q9GZU2 1588 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 SPAARA0A1B0GVQ0 90 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 FAM92AA1XBS5 289 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 LINC00587B1AMM8 73 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 FAM25AB3EWG3 89 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 FAM25CB3EWG5 89 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 FAM25GB3EWG6 89 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 NDUFB6O95139 128 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 APOC1P02654 83 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 UBE2G1P62253 170 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 C10orf82Q8WW14 230 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 SPTSSAQ969W0 71 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 PDCD10Q9BUL8 212 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 ARFGEF1Q9Y6D6 1849 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 F5P12259 2224 aa0.79□□□□□ -2.28
COPS3-211ENST00000495640 A0A087WTM6 91 aa0.78□□□□□ -2.28
COPS3-211ENST00000495640 A0A096LNT2 108 aa0.78□□□□□ -2.28
COPS3-211ENST00000495640 FXYD1O00168 92 aa0.78□□□□□ -2.28
COPS3-211ENST00000495640 LY6G6CO95867 125 aa0.78□□□□□ -2.28
COPS3-211ENST00000495640 CCL3L1P16619 93 aa0.78□□□□□ -2.28
COPS3-211ENST00000495640 ELOF1P60002 83 aaKnown RBP0.78□□□□□ -2.28
COPS3-211ENST00000495640 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.78□□□□□ -2.28
COPS3-211ENST00000495640 CFTRP13569 1480 aa0.78□□□□□ -2.28
COPS3-211ENST00000495640 QRICH2Q9H0J4 1663 aa0.78□□□□□ -2.29
COPS3-211ENST00000495640 FBN2P35556 2912 aa0.78□□□□□ -2.29
COPS3-211ENST00000495640 TANC1Q9C0D5 1861 aa0.78□□□□□ -2.29
COPS3-211ENST00000495640 TCRBV3S1A0A5B6 114 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 CLPSL1A2RUU4 121 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 PIPP12273 146 aaPredicted RBP0.77□□□□□ -2.29
COPS3-211ENST00000495640 FGF7P21781 194 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 RPL37P61927 97 aaKnown RBP0.77□□□□□ -2.29
COPS3-211ENST00000495640 PRB3Q04118 309 aaPredicted RBP0.77□□□□□ -2.29
COPS3-211ENST00000495640 CYP2G1PQ6ZSU1 146 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 C2orf88Q9BSF0 95 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 RERGLQ9H628 205 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 TMEM14BQ9NUH8 114 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 DAPK1P53355 1430 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 ZNF518AQ6AHZ1 1483 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 LOC285556D6RIA3 1793 aa0.77□□□□□ -2.29
COPS3-211ENST00000495640 ZNF469Q96JG9 3925 aaPredicted RBP0.76□□□□□ -2.29
COPS3-211ENST00000495640 CBLN1P23435 193 aa0.76□□□□□ -2.29
COPS3-211ENST00000495640 C20orf197Q8N268 126 aa0.76□□□□□ -2.29
COPS3-211ENST00000495640 BET1LQ9NYM9 111 aa0.76□□□□□ -2.29
COPS3-211ENST00000495640 SERP1Q9Y6X1 66 aa0.76□□□□□ -2.29
COPS3-211ENST00000495640 DOCK11Q5JSL3 2073 aa0.76□□□□□ -2.29
COPS3-211ENST00000495640 PATJQ8NI35 1801 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 A0A0D9SG42 100 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 SNCGO76070 127 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 UBE2D1P51668 147 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 SPINK13Q1W4C9 94 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 S100A7L2Q5SY68 101 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 Q6AWC8 147 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 Q8N8P6 123 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 PP6455Q8WZ26 134 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 RPRMQ9NS64 109 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 SCN3BQ9NY72 215 aa0.75□□□□□ -2.29
COPS3-211ENST00000495640 DOCK1Q14185 1865 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 MCRIP1C9JLW8 97 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 SPINT3P49223 89 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 SPINK9Q5DT21 86 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 COX7B2Q8TF08 81 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 COPS9Q8WXC6 57 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 NAA60Q9H7X0 242 aa0.74□□□□□ -2.29
COPS3-211ENST00000495640 RBBP6Q7Z6E9 1792 aaKnown RBP0.74□□□□□ -2.29
COPS3-211ENST00000495640 A2ML1A8K2U0 1454 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 IFT140Q96RY7 1462 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 NAIPQ13075 1403 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 SIPA1L3O60292 1781 aaPredicted RBP0.73□□□□□ -2.29
COPS3-211ENST00000495640 SSBP1Q04837 148 aaKnown RBP0.73□□□□□ -2.29
COPS3-211ENST00000495640 SPTSSBQ8NFR3 76 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 Q96NJ1 140 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 COA4Q9NYJ1 87 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 MYH8P13535 1937 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 WDR7Q9Y4E6 1490 aa0.73□□□□□ -2.29
COPS3-211ENST00000495640 NAV3Q8IVL0 2385 aa0.72□□□□□ -2.29
COPS3-211ENST00000495640 NWD2Q9ULI1 1742 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms