RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 KIR3DS1Q14943 382 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 HIST2H2BDQ6DRA6 164 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 Q6ZQT7 251 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 TRPT1Q86TN4 253 aaKnown RBP7.54□□□□□ -1.2
HDAC3-214ENST00000495485 C20orf78Q9BR46 151 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 GOLT1BQ9Y3E0 138 aa7.54□□□□□ -1.2
HDAC3-214ENST00000495485 LINC01549A6NIU2 74 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 MGPP08493 103 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 BTF3P20290 206 aaKnown RBP7.53□□□□□ -1.2
HDAC3-214ENST00000495485 KRTDAPP60985 99 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 OXLD1Q5BKU9 147 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 DEFB125Q8N687 156 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 MAP1LC3CQ9BXW4 147 aa7.53□□□□□ -1.2
HDAC3-214ENST00000495485 LOC389332A0A1B0GUA5 103 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 A8MWV9 139 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 G3V4G9 280 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 H7C1H1 209 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 M0R2P5 195 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 TCAPO15273 167 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 CRXO43186 299 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-214ENST00000495485 NPYP01303 97 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 IFI27P40305 119 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-214ENST00000495485 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 C14orf178Q8N769 122 aaPredicted RBP7.52□□□□□ -1.21
HDAC3-214ENST00000495485 Q8N8P6 123 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 TMEM70Q9BUB7 260 aa7.52□□□□□ -1.21
HDAC3-214ENST00000495485 TGP01266 2768 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 IGHV1-24A0A0C4DH33 117 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 F5H697 171 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 TSTD3H0UI37 97 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 HTN1P15515 57 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 ZNF124Q15973 351 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 ZNF876PQ49A33 203 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 POM121L12Q8N7R1 296 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 AGRNO00468 2067 aa7.51□□□□□ -1.21
HDAC3-214ENST00000495485 RBMY1BA6NDE4 496 aaKnown RBP7.5□□□□□ -1.21
HDAC3-214ENST00000495485 RBMY1EA6NEQ0 496 aaKnown RBP7.5□□□□□ -1.21
HDAC3-214ENST00000495485 LINC01546A6NGU7 62 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 SMKR1H3BMG3 65 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 RHODO00212 210 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 NCR2O95944 276 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 HBDP02042 147 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 RBMY1DP0C7P1 496 aaKnown RBP7.5□□□□□ -1.21
HDAC3-214ENST00000495485 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 Q6ZWC4 215 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 ST20Q9HBF5 79 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 MDFICQ9P1T7 246 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
HDAC3-214ENST00000495485 CIDEAO60543 219 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 C3orf79P0CE67 100 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 FCER1GP30273 86 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 PKIAP61925 76 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
HDAC3-214ENST00000495485 RPL32P62910 135 aaKnown RBP7.49□□□□□ -1.21
HDAC3-214ENST00000495485 LAGE3Q14657 143 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 ZNF56Q15929 161 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 PET117Q6UWS5 81 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 URB1-AS1Q96HZ7 61 aa7.49□□□□□ -1.21
HDAC3-214ENST00000495485 NRACQ8N912 160 aa7.48□□□□□ -1.21
HDAC3-214ENST00000495485 TMEM263Q8WUH6 116 aaKnown RBP7.48□□□□□ -1.21
HDAC3-214ENST00000495485 C16orf74Q96GX8 76 aa7.48□□□□□ -1.21
HDAC3-214ENST00000495485 KIR2DL4Q99706 377 aa7.48□□□□□ -1.21
HDAC3-214ENST00000495485 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
HDAC3-214ENST00000495485 KIF25-AS1Q9Y6Z4 181 aa7.48□□□□□ -1.21
HDAC3-214ENST00000495485 IGHV3OR16-12A0A075B7B8 117 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 PCP4L1A6NKN8 68 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 VCYO14598 125 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 ATP5LO75964 103 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 DEFA6Q01524 100 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 FAM74A4Q5TZK3 123 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 VAMP8Q9BV40 100 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 C19orf73Q9NVV2 129 aa7.47□□□□□ -1.21
HDAC3-214ENST00000495485 A0A087WWL8 130 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 TRAV26-2A0A0B4J265 109 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 TRBV6-5A0A0K0K1A5 114 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 A8MZ25 164 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 CRYGDP07320 174 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 RBMY1A1P0DJD3 496 aaKnown RBP7.46□□□□□ -1.22
HDAC3-214ENST00000495485 RBMY1CP0DJD4 496 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 RPL35AP18077 110 aaKnown RBP7.46□□□□□ -1.22
HDAC3-214ENST00000495485 APOC4P55056 127 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 RBMY1FQ15415 496 aaKnown RBP7.46□□□□□ -1.22
HDAC3-214ENST00000495485 RRN3P1Q2M238 152 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 LGALS9BQ3B8N2 356 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 TEX43Q6ZNM6 134 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 SPATA12Q7Z6I5 190 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 RASL10AQ92737 203 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 EDA2RQ9HAV5 297 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 MUC4Q99102 2169 aa7.46□□□□□ -1.22
HDAC3-214ENST00000495485 KIR2DL5BA0A0G2JN68 375 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 KIR2DL5BA0A0G2JPC4 375 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 SMIM9A6NGZ8 99 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 NUDT3O95989 172 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 GATA1P15976 413 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-214ENST00000495485 KRTAP10-11P60412 298 aa7.45□□□□□ -1.22
HDAC3-214ENST00000495485 SUMO4Q6EEV6 95 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms