RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 S4R3C0 116 aa4.66□□□□□ -1.66
PHC3-214ENST00000494943 IGKV3D-20A0A0C4DH25 116 aa4.66□□□□□ -1.66
PHC3-214ENST00000494943 IGHV3-66A0A0C4DH42 116 aa4.66□□□□□ -1.66
PHC3-214ENST00000494943 KIAA2026Q5HYC2 2103 aa4.66□□□□□ -1.66
PHC3-214ENST00000494943 CHD7Q9P2D1 2997 aa4.66□□□□□ -1.66
PHC3-214ENST00000494943 RANBP2P49792 3224 aaKnown RBP4.65□□□□□ -1.66
PHC3-214ENST00000494943 IGHV4OR15-8A0A075B7B6 117 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 A0A087WW49 117 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 BRI3O95415 125 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 A0A0J9YXV3 536 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 ADARB2-AS1A8MUL3 147 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 TNFRSF13BO14836 293 aaPredicted RBP4.65□□□□□ -1.66
PHC3-214ENST00000494943 RNASE1P07998 156 aaKnown RBP4.65□□□□□ -1.66
PHC3-214ENST00000494943 Q0VFX4 171 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 C9orf106Q8NAJ2 232 aa4.65□□□□□ -1.66
PHC3-214ENST00000494943 ARHGAP21Q5T5U3 1957 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 UNC80Q8N2C7 3258 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 PAX4O43316 350 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 USMG5Q96IX5 58 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 DKK4Q9UBT3 224 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 A0A087WWL8 130 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 IGFL4Q6B9Z1 124 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 Q6ZS46 218 aa4.65□□□□□ -1.67
PHC3-214ENST00000494943 Q9H8V8 135 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 KLK5Q9Y337 293 aaPredicted RBP4.64□□□□□ -1.67
PHC3-214ENST00000494943 TRBV27A0A0K0K1C4 114 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 MBD3L4A6NDZ8 208 aaPredicted RBP4.64□□□□□ -1.67
PHC3-214ENST00000494943 MBD3L3A6NE82 208 aaPredicted RBP4.64□□□□□ -1.67
PHC3-214ENST00000494943 MBD3L5A6NJ08 208 aaPredicted RBP4.64□□□□□ -1.67
PHC3-214ENST00000494943 IGIPA6NJ69 53 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 NDUFA4O00483 81 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 DAD1P61803 113 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 C4orf26Q17RF5 130 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 POM121L12Q8N7R1 296 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 IGHV7-4-1A0A0J9YVY3 117 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 EXPH5Q8NEV8 1989 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 IGHV1OR15-1A0A075B7D0 117 aa4.64□□□□□ -1.67
PHC3-214ENST00000494943 A0A0C4DFX4 3053 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 RPL35AP18077 110 aaKnown RBP4.63□□□□□ -1.67
PHC3-214ENST00000494943 LOXP28300 417 aaPredicted RBP4.63□□□□□ -1.67
PHC3-214ENST00000494943 C11orf44Q8N8P7 122 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 LINC00308Q8TCZ7 52 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 H3BUA1 57 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 FUSP35637 526 aaKnown RBP eCLIP4.63□□□□□ -1.67
PHC3-214ENST00000494943 DCANP1Q8TF63 244 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 CCKP06307 115 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 XCL1P47992 114 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 XCL2Q9UBD3 114 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 LAMA2P24043 3122 aaKnown RBP4.63□□□□□ -1.67
PHC3-214ENST00000494943 RPL39P62891 51 aaKnown RBP4.63□□□□□ -1.67
PHC3-214ENST00000494943 WFDC11Q8NEX6 87 aa4.63□□□□□ -1.67
PHC3-214ENST00000494943 E7EUB6 86 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 HAMPP81172 84 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 RPL36AP83881 106 aaKnown RBP4.62□□□□□ -1.67
PHC3-214ENST00000494943 RPL36ALQ969Q0 106 aaKnown RBP4.62□□□□□ -1.67
PHC3-214ENST00000494943 SHANK1Q9Y566 2161 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 TANC2Q9HCD6 1990 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 TRAV23DV6A0A075B6W5 121 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 A0A0U1RQV1 116 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 U3KQE9 123 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 PMAIP1Q13794 54 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 C6orf226Q5I0X4 101 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 ZNRD1Q9P1U0 126 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 EYSQ5T1H1 3165 aa4.62□□□□□ -1.67
PHC3-214ENST00000494943 C1orf229Q6ZS94 237 aaPredicted RBP4.62□□□□□ -1.67
PHC3-214ENST00000494943 IGLV4-3A0A075B6K6 122 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 POLR2KP53803 58 aaKnown RBP4.61□□□□□ -1.67
PHC3-214ENST00000494943 ZFAND3Q9H8U3 227 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 SND1-IT1Q9HBX3 110 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 ZNF672Q499Z4 452 aaPredicted RBP4.61□□□□□ -1.67
PHC3-214ENST00000494943 COL6A3P12111 3177 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 TRBV12-3P01733 135 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 CTSGP08311 255 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 ZNF625Q96I27 306 aaPredicted RBP4.61□□□□□ -1.67
PHC3-214ENST00000494943 TOMM7Q9P0U1 55 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 LAMA3Q16787 3333 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 CDH23Q9H251 3354 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 TET1Q8NFU7 2136 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 IGHV3OR16-13A0A075B7E8 117 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 IGHV3-74A0A0B4J1X5 117 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 IGHV3-35A0A0C4DH35 117 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 PLAC8L1A1L4L8 177 aa4.61□□□□□ -1.67
PHC3-214ENST00000494943 IGHV3-49A0A0A0MS15 119 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 RPL28P46779 137 aaKnown RBP4.6□□□□□ -1.67
PHC3-214ENST00000494943 PRAC2D3DTV9 90 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 TSPEAR-AS2P59090 65 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 UBE2BP63146 152 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 A0A0U1RRA0 63 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 SPRY2O43597 315 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 RNASE6Q93091 150 aaKnown RBP4.6□□□□□ -1.67
PHC3-214ENST00000494943 LECT2O14960 151 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 NBL1P41271 181 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 ENHOQ6UWT2 76 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 VMO1Q7Z5L0 202 aa4.6□□□□□ -1.67
PHC3-214ENST00000494943 BSPH1Q075Z2 132 aa4.59□□□□□ -1.67
PHC3-214ENST00000494943 PIK3CD-AS1Q5SR53 167 aa4.59□□□□□ -1.67
PHC3-214ENST00000494943 PDE4DIPQ5VU43 2346 aa4.59□□□□□ -1.67
PHC3-214ENST00000494943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.59□□□□□ -1.67
PHC3-214ENST00000494943 F8WEM9 126 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms