RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 GNG4P50150 75 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 Q6AWC8 147 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 RPL7L1Q6DKI1 246 aaKnown RBP1.61□□□□□ -2.15
VPS26A-206ENST00000489794 TMEM141Q96I45 108 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 A2ML1A8K2U0 1454 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 MYOM2P54296 1465 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 TECTAO75443 2155 aa1.61□□□□□ -2.15
VPS26A-206ENST00000489794 MUC22E2RYF6 1773 aaPredicted RBP1.6□□□□□ -2.15
VPS26A-206ENST00000489794 LOC101927531A0A1B0GV80 90 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 TPPP2P59282 170 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 FXYD4P59646 89 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 UBE2G1P62253 170 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 Q56UQ5 140 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 IFI27L1Q96BM0 104 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 TCEAL7Q9BRU2 100 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 MRPL35Q9NZE8 188 aaKnown RBP1.6□□□□□ -2.15
VPS26A-206ENST00000489794 QRICH2Q9H0J4 1663 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 PEAK1Q9H792 1746 aa1.6□□□□□ -2.15
VPS26A-206ENST00000489794 SPAG17Q6Q759 2223 aa1.59□□□□□ -2.15
VPS26A-206ENST00000489794 COL6A6A6NMZ7 2263 aa1.59□□□□□ -2.15
VPS26A-206ENST00000489794 TCRBV3S1A0A5B6 114 aa1.59□□□□□ -2.15
VPS26A-206ENST00000489794 HIGD1CA8MV81 97 aa1.59□□□□□ -2.15
VPS26A-206ENST00000489794 PPP3R1P63098 170 aa1.59□□□□□ -2.15
VPS26A-206ENST00000489794 Q6ZS92 163 aa1.59□□□□□ -2.15
VPS26A-206ENST00000489794 NCOA6Q14686 2063 aaPredicted RBP1.59□□□□□ -2.16
VPS26A-206ENST00000489794 CITO14578 2027 aa1.58□□□□□ -2.16
VPS26A-206ENST00000489794 C20orf202A1L168 122 aa1.58□□□□□ -2.16
VPS26A-206ENST00000489794 A6NIN4 97 aa1.58□□□□□ -2.16
VPS26A-206ENST00000489794 CATR1Q13166 79 aa1.58□□□□□ -2.16
VPS26A-206ENST00000489794 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
VPS26A-206ENST00000489794 MRPL54Q6P161 138 aaKnown RBP1.58□□□□□ -2.16
VPS26A-206ENST00000489794 TSKUQ8WUA8 353 aa1.58□□□□□ -2.16
VPS26A-206ENST00000489794 C10orf82Q8WW14 230 aa1.58□□□□□ -2.16
VPS26A-206ENST00000489794 KTN1Q86UP2 1357 aaKnown RBP1.58□□□□□ -2.16
VPS26A-206ENST00000489794 DAPK1P53355 1430 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 DLEC1Q9Y238 1755 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 KIAA0100Q14667 2235 aaKnown RBP1.57□□□□□ -2.16
VPS26A-206ENST00000489794 ASCC3Q8N3C0 2202 aaKnown RBP1.57□□□□□ -2.16
VPS26A-206ENST00000489794 TRAV12-3A0A0B4J271 114 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 APOC4-APOC2K7ER74 178 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 NCR3O14931 201 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 APOC2P02655 101 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 FXYD3Q14802 87 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 C9orf153Q5TBE3 101 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 C14orf144Q96I85 54 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 RPRMQ9NS64 109 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 RREB1Q92766 1687 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 SPTBP11277 2137 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 LAMB1P07942 1786 aa1.57□□□□□ -2.16
VPS26A-206ENST00000489794 NBDYA0A0U1RRE5 68 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 CBLN1P23435 193 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 NPC2P61916 151 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 CYP2G1PQ6ZSU1 146 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 Q86TA4 180 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 NDUFA11Q86Y39 141 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 Q8N8P6 123 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 SPTSSBQ8NFR3 76 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 AMELYQ99218 206 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 RBBP6Q7Z6E9 1792 aaKnown RBP1.56□□□□□ -2.16
VPS26A-206ENST00000489794 PZPP20742 1482 aa1.56□□□□□ -2.16
VPS26A-206ENST00000489794 ZNF142P52746 1687 aaPredicted RBP1.55□□□□□ -2.16
VPS26A-206ENST00000489794 ABCA4P78363 2273 aa1.55□□□□□ -2.16
VPS26A-206ENST00000489794 TNFP01375 233 aa1.55□□□□□ -2.16
VPS26A-206ENST00000489794 RBM3P98179 157 aaKnown RBP1.55□□□□□ -2.16
VPS26A-206ENST00000489794 INSL4Q14641 139 aa1.55□□□□□ -2.16
VPS26A-206ENST00000489794 C12orf73Q69YU5 71 aa1.55□□□□□ -2.16
VPS26A-206ENST00000489794 XAF1Q6GPH4 301 aa1.55□□□□□ -2.16
VPS26A-206ENST00000489794 DLG5Q8TDM6 1919 aa1.55□□□□□ -2.16
VPS26A-206ENST00000489794 ESPL1Q14674 2120 aa1.54□□□□□ -2.16
VPS26A-206ENST00000489794 Q6ZQY7 126 aa1.54□□□□□ -2.16
VPS26A-206ENST00000489794 GTF2H5Q6ZYL4 71 aa1.54□□□□□ -2.16
VPS26A-206ENST00000489794 DEFB132Q7Z7B7 95 aa1.54□□□□□ -2.16
VPS26A-206ENST00000489794 C5orf56Q8N8D9 126 aa1.54□□□□□ -2.16
VPS26A-206ENST00000489794 DSCR8Q96T75 97 aa1.54□□□□□ -2.16
VPS26A-206ENST00000489794 AFDNP55196 1824 aaKnown RBP1.54□□□□□ -2.16
VPS26A-206ENST00000489794 TRBV10-3A0A0K0K1G6 114 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 TEX49A0A1B0GTD5 131 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 OOSP1A8MZH6 123 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 FXYD1O00168 92 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 IFNA17P01571 189 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 SMIM6P0DI80 62 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 RBP2P50120 134 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 EFNA4P52798 201 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 CCL19Q99731 98 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 IER3IP1Q9Y5U9 82 aa1.53□□□□□ -2.16
VPS26A-206ENST00000489794 PIGBOS1A0A0B4J2F0 54 aa1.52□□□□□ -2.17
VPS26A-206ENST00000489794 PPP3R2Q96LZ3 170 aa1.52□□□□□ -2.17
VPS26A-206ENST00000489794 NRKQ7Z2Y5 1582 aa1.51□□□□□ -2.17
VPS26A-206ENST00000489794 IFT140Q96RY7 1462 aa1.51□□□□□ -2.17
VPS26A-206ENST00000489794 BLMP54132 1417 aaPredicted RBP1.51□□□□□ -2.17
VPS26A-206ENST00000489794 SVBPQ8N300 66 aa1.51□□□□□ -2.17
VPS26A-206ENST00000489794 CAV3P56539 151 aa1.5□□□□□ -2.17
VPS26A-206ENST00000489794 LINC00575Q6W349 94 aa1.5□□□□□ -2.17
VPS26A-206ENST00000489794 C20orf197Q8N268 126 aa1.5□□□□□ -2.17
VPS26A-206ENST00000489794 COA4Q9NYJ1 87 aa1.5□□□□□ -2.17
VPS26A-206ENST00000489794 ROBO1Q9Y6N7 1651 aa1.5□□□□□ -2.17
VPS26A-206ENST00000489794 MRC2Q9UBG0 1479 aa1.5□□□□□ -2.17
VPS26A-206ENST00000489794 MED12Q93074 2177 aa1.49□□□□□ -2.17
VPS26A-206ENST00000489794 NRXN2Q9P2S2 1712 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms