RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SLIRPQ9GZT3 109 aaKnown RBP6.89□□□□□ -1.31
HDAC6-233ENST00000489352 MIXL1Q9H2W2 232 aa6.89□□□□□ -1.31
HDAC6-233ENST00000489352 LYRM2Q9NU23 88 aaPredicted RBP6.89□□□□□ -1.31
HDAC6-233ENST00000489352 OR7C2O60412 319 aa6.88□□□□□ -1.31
HDAC6-233ENST00000489352 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
HDAC6-233ENST00000489352 TMEM97Q5BJF2 176 aa6.88□□□□□ -1.31
HDAC6-233ENST00000489352 UQCC1Q9NVA1 299 aa6.88□□□□□ -1.31
HDAC6-233ENST00000489352 GOLT1AQ6ZVE7 132 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 MIR17HGQ75NE6 70 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 MCFD2Q8NI22 146 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 FXYD5Q96DB9 178 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 OR5AC2Q9NZP5 309 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 C11orf21Q9P2W6 132 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 WDR83OSQ9Y284 106 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 PHLDA3Q9Y5J5 127 aa6.87□□□□□ -1.31
HDAC6-233ENST00000489352 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 L7N2F9 121 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 RGS5O15539 181 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 SFT2D2O95562 160 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 CFC1BP0CG36 223 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 S100A5P33763 92 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 BCAP31P51572 246 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 VAMP2P63027 116 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 TPRXLQ17RH7 258 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 ZFP69Q49AA0 526 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 GCSAMLQ5JQS6 135 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 SPANXN2Q5MJ10 180 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 S100ZQ8WXG8 99 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 TVP23CQ96ET8 276 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 FAM167A-AS1Q96KT0 104 aa6.86□□□□□ -1.31
HDAC6-233ENST00000489352 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
HDAC6-233ENST00000489352 GCGP01275 180 aa6.85□□□□□ -1.31
HDAC6-233ENST00000489352 AMTP48728 403 aa6.85□□□□□ -1.31
HDAC6-233ENST00000489352 SULT1A2P50226 295 aa6.85□□□□□ -1.31
HDAC6-233ENST00000489352 SMIM4Q8WVI0 70 aa6.85□□□□□ -1.31
HDAC6-233ENST00000489352 ANKRD20A5PA0PJZ0 165 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 GAGE12HA6NDE8 117 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 FGF7P21781 194 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 UBE2L3P68036 154 aaKnown RBP6.84□□□□□ -1.31
HDAC6-233ENST00000489352 GAGE2BQ13066 116 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 PPP1R1AQ13522 171 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 ZNF674Q2M3X9 581 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 OR11H4Q8NGC9 324 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 MITD1Q8WV92 249 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 GSKIPQ9P0R6 139 aa6.84□□□□□ -1.31
HDAC6-233ENST00000489352 CARHSP1Q9Y2V2 147 aaKnown RBP6.84□□□□□ -1.31
HDAC6-233ENST00000489352 CST7O76096 145 aa6.83□□□□□ -1.32
HDAC6-233ENST00000489352 KRTAP1-4P0C5Y4 121 aa6.83□□□□□ -1.32
HDAC6-233ENST00000489352 ZNF80P51504 273 aaPredicted RBP6.83□□□□□ -1.32
HDAC6-233ENST00000489352 OR10G8Q8NGN5 311 aa6.83□□□□□ -1.32
HDAC6-233ENST00000489352 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
HDAC6-233ENST00000489352 A0A087WZ39 114 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 C7orf66A4D0T2 115 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 FAUP35544 74 aaKnown RBP6.82□□□□□ -1.32
HDAC6-233ENST00000489352 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 IL18Q14116 193 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 SMUG1Q53HV7 270 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 FAM162BQ5T6X4 162 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 SFRP2Q96HF1 295 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 SGK494Q96LW2 274 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 OTORQ9NRC9 128 aa6.82□□□□□ -1.32
HDAC6-233ENST00000489352 IGLV7-46A0A075B6I9 117 aa6.81□□□□□ -1.32
HDAC6-233ENST00000489352 GVQW2A0A096LPI5 108 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-233ENST00000489352 H3BVH4 76 aa6.81□□□□□ -1.32
HDAC6-233ENST00000489352 CTDSP2O14595 271 aa6.81□□□□□ -1.32
HDAC6-233ENST00000489352 IAH1Q2TAA2 248 aaPredicted RBP6.81□□□□□ -1.32
HDAC6-233ENST00000489352 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
HDAC6-233ENST00000489352 NTM-AS1Q6ZSK4 140 aa6.81□□□□□ -1.32
HDAC6-233ENST00000489352 IL36BQ9NZH7 164 aa6.81□□□□□ -1.32
HDAC6-233ENST00000489352 IGHV1-24A0A0C4DH33 117 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 M0R381 172 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 S100A11P31949 105 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 ZNF56Q15929 161 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 PHF5AQ7RTV0 110 aaKnown RBP6.8□□□□□ -1.32
HDAC6-233ENST00000489352 C20orf203Q8NBC4 194 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 NEXN-AS1Q8NBZ9 246 aa6.8□□□□□ -1.32
HDAC6-233ENST00000489352 IGKV3OR2-268A0A0C4DH90 116 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 TRBV6-1A0A0K0K1D8 114 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 K7EQM0 130 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 RAB4BP61018 213 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 HBG1P69891 147 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 HBG2P69892 147 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 C9orf116Q5BN46 136 aaPredicted RBP6.79□□□□□ -1.32
HDAC6-233ENST00000489352 AQP10Q96PS8 301 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 NPCDR1Q9BY65 106 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 MBD2Q9UBB5 411 aa6.79□□□□□ -1.32
HDAC6-233ENST00000489352 A0A1B0GUV1 79 aa6.78□□□□□ -1.32
HDAC6-233ENST00000489352 ARMS2P0C7Q2 107 aa6.78□□□□□ -1.32
HDAC6-233ENST00000489352 TSKUQ8WUA8 353 aa6.78□□□□□ -1.32
HDAC6-233ENST00000489352 SLC25A21Q9BQT8 299 aaPredicted RBP6.78□□□□□ -1.32
HDAC6-233ENST00000489352 CCDC32Q9BV29 185 aa6.78□□□□□ -1.32
HDAC6-233ENST00000489352 IGLV4-60A0A075B6I1 120 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 IGKV3D-20A0A0C4DH25 116 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 B4DEV8 164 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms