RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 A0A1W2PPQ1 181 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 C19orf71A6NCJ1 209 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 PGPEP1LA6NFU8 196 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 PFDN1O60925 122 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 NXPH4O95158 308 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 IFNA7P01567 189 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 SFTA3P0C7M3 94 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 LINC00694P0DN24 101 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 HTN3P15516 51 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 MEF2BQ02080 365 aaPredicted RBP3.91□□□□□ -1.78
CUX1-208ENST00000485792 FAM162BQ5T6X4 162 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 ZFP2Q6ZN57 461 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 SMIM12Q96EX1 92 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 HHLA3Q9XRX5 114 aa3.91□□□□□ -1.78
CUX1-208ENST00000485792 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
CUX1-208ENST00000485792 IGLV2-18A0A075B6J9 118 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 A0A0J9YY99 117 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 NBDYA0A0U1RRE5 68 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 TRBV6-4A0A1B0GX49 114 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 K7EQD1 137 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 SNAI2O43623 268 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 SH2D1AO60880 128 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 IGHV3-53P01767 116 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 BCL2P10415 239 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 TAGLN2P37802 199 aaKnown RBP3.9□□□□□ -1.79
CUX1-208ENST00000485792 OR5I1Q13606 314 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 ZFP69Q49AA0 526 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 ZNF506Q5JVG8 444 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 CST9LP1Q5W188 147 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 LYPD5Q6UWN5 251 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 Q6ZRN7 208 aaPredicted RBP3.9□□□□□ -1.79
CUX1-208ENST00000485792 LINC00336Q6ZUF6 198 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 Q9H8V8 135 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 JPT2Q9H910 190 aa3.9□□□□□ -1.79
CUX1-208ENST00000485792 A8MWV9 139 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 K7EP13 123 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 PDE6DO43924 150 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 NUDT3O95989 172 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 ORM1P02763 201 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 CRYGDP07320 174 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 OR5AL1P0C617 328 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 ARMS2P0C7Q2 107 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 AKR1C3P42330 323 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 RPL35P42766 123 aaKnown RBP3.89□□□□□ -1.79
CUX1-208ENST00000485792 CCL18P55774 89 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 LINC00315P59091 139 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 RPL19P84098 196 aaKnown RBP3.89□□□□□ -1.79
CUX1-208ENST00000485792 MRPL23Q16540 153 aaKnown RBP3.89□□□□□ -1.79
CUX1-208ENST00000485792 BAGE2Q86Y30 109 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 SLC25A29Q8N8R3 303 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 NHLRC2Q8NBF2 726 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 OR4C5Q8NGB2 326 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 SFRP2Q96HF1 295 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 SAMD10Q9BYL1 202 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 PARLQ9H300 379 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 KIF25-AS1Q9Y6Z4 181 aa3.89□□□□□ -1.79
CUX1-208ENST00000485792 B4DEV8 164 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 C9JCJ5 164 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 TMEM250H0YL14 139 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 M0R2N4 97 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 IGLC6P0CF74 106 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 DNAH10OSP0CZ25 163 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 MGST1P10620 155 aaKnown RBP3.88□□□□□ -1.79
CUX1-208ENST00000485792 ASIPP42127 132 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 UBE2G1P62253 170 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 BLOC1S1P78537 153 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 PRR27Q6MZM9 219 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 NEGR1Q7Z3B1 354 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 SH2D6Q7Z4S9 175 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 Q8N1X5 172 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 CNFNQ9BYD5 112 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 GNG13Q9P2W3 67 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 VAX2Q9UIW0 290 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 NAGKQ9UJ70 344 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 ICOSQ9Y6W8 199 aa3.88□□□□□ -1.79
CUX1-208ENST00000485792 TRGV4A0A0C4DH28 118 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 RAB19A4D1S5 217 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 TEX46H3BTG2 121 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 FUSP35637 526 aaKnown RBP eCLIP3.87□□□□□ -1.79
CUX1-208ENST00000485792 FOXA3P55318 350 aaPredicted RBP3.87□□□□□ -1.79
CUX1-208ENST00000485792 ALKAL2Q6UX46 152 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 OR10G8Q8NGN5 311 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 PCNPQ8WW12 178 aaKnown RBP3.87□□□□□ -1.79
CUX1-208ENST00000485792 DNAJC30Q96LL9 226 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 TNFRSF18Q9Y5U5 241 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 LY96Q9Y6Y9 160 aa3.87□□□□□ -1.79
CUX1-208ENST00000485792 TRBV10-1A0A0K0K1A3 114 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 RBFOX3A6NFN3 312 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 C9JQL5 133 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 H3BVH4 76 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 K7EN84 100 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 M0R036 132 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 RHODO00212 210 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 SIVA1O15304 175 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 RHOHQ15669 191 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 CENPWQ5EE01 88 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 TTC32Q5I0X7 151 aa3.86□□□□□ -1.79
CUX1-208ENST00000485792 C1orf134Q5TEV5 83 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms