RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 ZNF415Q09FC8 603 aa10.21□□□□□ -0.78
CLK3-204ENST00000483723 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.78
CLK3-204ENST00000483723 RASL10AQ92737 203 aa10.21□□□□□ -0.78
CLK3-204ENST00000483723 SPXQ9BT56 116 aa10.21□□□□□ -0.78
CLK3-204ENST00000483723 A0A096LNJ9 63 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 M0R2P5 195 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 C3orf79P0CE67 100 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 SMIM17P0DL12 118 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 PMCHL1Q16048 86 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 ZNF876PQ49A33 203 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 Q8N8P6 123 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 Q8N976 141 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 CSNK1G2-AS1Q8NCQ2 148 aa10.2□□□□□ -0.78
CLK3-204ENST00000483723 PPP1R17O96001 155 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 HTN1P15515 57 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 C1QTNF4Q9BXJ3 329 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 LEPROTL1O95214 131 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 MGPP08493 103 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 IL17DQ8TAD2 202 aa10.19□□□□□ -0.78
CLK3-204ENST00000483723 SCGB1D1O95968 90 aa10.18□□□□□ -0.78
CLK3-204ENST00000483723 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
CLK3-204ENST00000483723 AZU1P20160 251 aa10.18□□□□□ -0.78
CLK3-204ENST00000483723 KRTDAPP60985 99 aa10.18□□□□□ -0.78
CLK3-204ENST00000483723 GTSCR1Q86UQ5 136 aa10.18□□□□□ -0.78
CLK3-204ENST00000483723 JMJD1CQ15652 2540 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 A0A087WWL8 130 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 SUMO2P61956 95 aaKnown RBP10.17□□□□□ -0.78
CLK3-204ENST00000483723 RPL32P62910 135 aaKnown RBP10.17□□□□□ -0.78
CLK3-204ENST00000483723 SUMO4Q6EEV6 95 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 TMEM208Q9BTX3 173 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 NDUFAF3Q9BU61 184 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 GOLT1BQ9Y3E0 138 aa10.17□□□□□ -0.78
CLK3-204ENST00000483723 BTF3P20290 206 aaKnown RBP10.16□□□□□ -0.78
CLK3-204ENST00000483723 UFSP1Q6NVU6 142 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
CLK3-204ENST00000483723 RPL39LQ96EH5 51 aaKnown RBP10.16□□□□□ -0.78
CLK3-204ENST00000483723 SMIM2Q9BVW6 85 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 EDA2RQ9HAV5 297 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 HSPB8Q9UJY1 196 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 TRBV6-5A0A0K0K1A5 114 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 A8MWV9 139 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 IGLL1P15814 213 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 FCER1GP30273 86 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
CLK3-204ENST00000483723 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
CLK3-204ENST00000483723 M0QY20 66 aa10.15□□□□□ -0.78
CLK3-204ENST00000483723 HBDP02042 147 aa10.15□□□□□ -0.78
CLK3-204ENST00000483723 TEX43Q6ZNM6 134 aa10.15□□□□□ -0.78
CLK3-204ENST00000483723 TMEM158Q8WZ71 300 aa10.15□□□□□ -0.78
CLK3-204ENST00000483723 CSTL1Q9H114 145 aa10.15□□□□□ -0.78
CLK3-204ENST00000483723 K7EMI3 77 aa10.14□□□□□ -0.79
CLK3-204ENST00000483723 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
CLK3-204ENST00000483723 TMEM263Q8WUH6 116 aaKnown RBP10.14□□□□□ -0.79
CLK3-204ENST00000483723 TMEM70Q9BUB7 260 aa10.14□□□□□ -0.79
CLK3-204ENST00000483723 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 F5H697 171 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 SYS1-DBNDD2H3BUS1 97 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 RS1O15537 224 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 S100A12P80511 92 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 FAM74A4Q5TZK3 123 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 C3orf56Q8N813 242 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 NACAE9PAV3 2078 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 LAGE3Q14657 143 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 SPATA12Q7Z6I5 190 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 MDFIQ99750 246 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 MAP1LC3CQ9BXW4 147 aa10.13□□□□□ -0.79
CLK3-204ENST00000483723 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 PLAC8L1A1L4L8 177 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 DAZ2Q13117 558 aaKnown RBP10.12□□□□□ -0.79
CLK3-204ENST00000483723 LGALS9BQ3B8N2 356 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 PET117Q6UWS5 81 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 C12orf54Q6X4T0 127 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 ZNF664Q8N3J9 261 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 ST20Q9HBF5 79 aa10.12□□□□□ -0.79
CLK3-204ENST00000483723 ZNF56Q15929 161 aa10.11□□□□□ -0.79
CLK3-204ENST00000483723 C16orf74Q96GX8 76 aa10.11□□□□□ -0.79
CLK3-204ENST00000483723 OVOL2Q9BRP0 275 aa10.11□□□□□ -0.79
CLK3-204ENST00000483723 MRPL16Q9NX20 251 aaKnown RBP10.11□□□□□ -0.79
CLK3-204ENST00000483723 RHODO00212 210 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 TCAPO15273 167 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 ATRQ13535 2644 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 KIR2DL5BA0A0G2JN68 375 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 KIR2DL5BA0A0G2JPC4 375 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 PCP4L1A6NKN8 68 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 VCYO14598 125 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 ORMDL2Q53FV1 153 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 ZFP2Q6ZN57 461 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 KIR2DL5AQ8N109 375 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 KIR2DL5BQ8NHK3 375 aa10.1□□□□□ -0.79
CLK3-204ENST00000483723 H7C1H1 209 aa10.09□□□□□ -0.79
CLK3-204ENST00000483723 PKIAP61925 76 aa10.09□□□□□ -0.79
CLK3-204ENST00000483723 RRN3P1Q2M238 152 aa10.09□□□□□ -0.79
CLK3-204ENST00000483723 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
CLK3-204ENST00000483723 IFI27L1Q96BM0 104 aa10.09□□□□□ -0.79
CLK3-204ENST00000483723 DNHD1Q96M86 4753 aa10.09□□□□□ -0.79
CLK3-204ENST00000483723 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms