RNA–Protein interactions for RNA: ENST00000481788.1

RBM28-205, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 1,052 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-205	ENST00000481788	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	FAM122C	Q6P4D5	195 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	TMUB2	Q71RG4	321 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	TMED6	Q8WW62	240 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	RMI2	Q96E14	147 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	PRADC1	Q9BSG0	188 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	KLK12	Q9UKR0	248 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	TNFSF18	Q9UNG2	199 aa		4.17	□□□□□ -1.74
RBM28-205	ENST00000481788	LSM5	Q9Y4Y9	91 aa	Known RBP	4.17	□□□□□ -1.74
RBM28-205	ENST00000481788		A0A087WYN8	130 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	IFITM10	A6NMD0	228 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	USP17L23	D6RBM5	183 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	BCL2L11	O43521	198 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	IFNA7	P01567	189 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	PVALB	P20472	110 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	RPL29	P47914	159 aa	Known RBP	4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	CAMLG	P49069	296 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	CAV2	P51636	162 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	TAS2R30	P59541	319 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	IFITM2	Q01629	132 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	GCSAML	Q5JQS6	135 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	UFSP1	Q6NVU6	142 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	WDR73	Q6P4I2	378 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	ENHO	Q6UWT2	76 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	KCNRG	Q8N5I3	272 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	TVP23C	Q96ET8	276 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	LINC00479	Q96M42	142 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	SLC25A2	Q9BXI2	301 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	CTDSP1	Q9GZU7	261 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	C11orf1	Q9H5F2	150 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	SLC39A9	Q9NUM3	307 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	OR5AC2	Q9NZP5	309 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	WDR83OS	Q9Y284	106 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	PAM16	Q9Y3D7	125 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	LENEP	Q9Y5L5	61 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	FSIP2	Q5CZC0	6907 aa		4.16	□□□□□ -1.74
RBM28-205	ENST00000481788	IGHV3-73	A0A0B4J1V6	119 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	RBAKDN	A6NC62	111 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	PHOX2A	O14813	284 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	CIDEA	O60543	219 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	OR10J4	P0C629	311 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	MGST1	P10620	155 aa	Known RBP	4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	VAMP2	P63027	116 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	PRR3	P79522	188 aa	Known RBP	4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	ZNF876P	Q49A33	203 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	C14orf177	Q52M58	125 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	FAM159A	Q6UWV7	190 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	CYB561D1	Q8N8Q1	229 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	SPACA4	Q8TDM5	124 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	PTH2	Q96A98	100 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	UBE2W	Q96B02	151 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	FXYD5	Q96DB9	178 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	PHYHIPL	Q96FC7	376 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	C9orf85	Q96MD7	179 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	AQP10	Q96PS8	301 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	ZNF471	Q9BX82	626 aa	Predicted RBP	4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	SAMD10	Q9BYL1	202 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	PLAC8	Q9NZF1	115 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	TIMM9	Q9Y5J7	89 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788	KIF25-AS1	Q9Y6Z4	181 aa		4.15	□□□□□ -1.75
RBM28-205	ENST00000481788		A0A087WWC5	75 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788		A0A1B0GUV1	79 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	PGPEP1L	A6NFU8	196 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	NBEAP1	P0C6P0	100 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	CHTF8	P0CG12	524 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	RPL12	P30050	165 aa	Known RBP	4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	KRTAP10-6	P60371	365 aa	Predicted RBP	4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	RAB14	P61106	215 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	CNBP	P62633	177 aa	Known RBP	4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	RPL19	P84098	196 aa	Known RBP	4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	GAGE1	Q13065	139 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	GAGE4	Q13068	117 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	GAGE5	Q13069	117 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	IL15RA	Q13261	267 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	NDUFA5	Q16718	116 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	ZNF506	Q5JVG8	444 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	FFAR4	Q5NUL3	377 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	TEX261	Q6UWH6	196 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788		Q6ZRG5	221 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	SLC51B	Q86UW2	128 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	HSD17B11	Q8NBQ5	300 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	OR1L4	Q8NGR5	311 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	PFDN5	Q99471	154 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	CHCHD7	Q9BUK0	85 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	OR51M1	Q9H341	326 aa		4.14	□□□□□ -1.75
RBM28-205	ENST00000481788	TAAR5	O14804	337 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	RNASE3	P12724	160 aa	Known RBP	4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	TPT1	P13693	172 aa	Known RBP	4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	EIF5A	P63241	154 aa	Known RBP	4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	STX12	Q86Y82	276 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	C14orf178	Q8N769	122 aa	Predicted RBP	4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	OR10G9	Q8NGN4	311 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	RNF185	Q96GF1	192 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	ZC2HC1A	Q96GY0	325 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	PARL	Q9H300	379 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	NAGK	Q9UJ70	344 aa		4.13	□□□□□ -1.75
RBM28-205	ENST00000481788	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	ATP6V1G1	O75348	118 aa		4.12	□□□□□ -1.75
RBM28-205	ENST00000481788	SEC11B	P0C7V7	166 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms