RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 A0A087WWL8 130 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 NPSP0C0P6 89 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 C9orf85Q96MD7 179 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 FOXC2Q99958 501 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 WNK1Q9H4A3 2382 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 NUDT3O95989 172 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 FGF6P10767 208 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 DEFB131AP59861 70 aa9.63□□□□□ -0.87
SEC13-216ENST00000479868 IGHV1OR15-1A0A075B7D0 117 aa9.62□□□□□ -0.87
SEC13-216ENST00000479868 C11orf44Q8N8P7 122 aa9.62□□□□□ -0.87
SEC13-216ENST00000479868 ZMAT4Q9H898 229 aa9.62□□□□□ -0.87
SEC13-216ENST00000479868 ATP5LO75964 103 aa9.61□□□□□ -0.87
SEC13-216ENST00000479868 C2orf91Q6ZV80 131 aa9.61□□□□□ -0.87
SEC13-216ENST00000479868 RBMY1A1P0DJD3 496 aaKnown RBP9.61□□□□□ -0.87
SEC13-216ENST00000479868 RBMY1CP0DJD4 496 aa9.61□□□□□ -0.87
SEC13-216ENST00000479868 RBMY1FQ15415 496 aaKnown RBP9.61□□□□□ -0.87
SEC13-216ENST00000479868 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 ORMDL2Q53FV1 153 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 SUMO4Q6EEV6 95 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 NEGR1Q7Z3B1 354 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 YAE1D1Q9NRH1 226 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 HHLA3Q9XRX5 114 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 HLA-DRB4P13762 266 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 Q6ZVH6 145 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 RAX2Q96IS3 184 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 CSTL1Q9H114 145 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 HLA-DRB4X5D2U9 266 aa9.6□□□□□ -0.87
SEC13-216ENST00000479868 A0A1W2PRX2 142 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 RBMY1BA6NDE4 496 aaKnown RBP9.59□□□□□ -0.87
SEC13-216ENST00000479868 RBMY1EA6NEQ0 496 aaKnown RBP9.59□□□□□ -0.87
SEC13-216ENST00000479868 H3BMM0 161 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 RBMY1DP0C7P1 496 aaKnown RBP9.59□□□□□ -0.87
SEC13-216ENST00000479868 DEFB114Q30KQ6 69 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 BVES-AS1Q5T3Y7 98 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 FAM74A4Q5TZK3 123 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 BOD1L2Q8IYS8 172 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 DYNLRB2Q8TF09 96 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 ANK3Q12955 4377 aaKnown RBP9.59□□□□□ -0.87
SEC13-216ENST00000479868 F5H697 171 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 PPP1R17O96001 155 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 IGKCP01834 107 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 NMUP48645 174 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
SEC13-216ENST00000479868 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
SEC13-216ENST00000479868 FASNP49327 2511 aaKnown RBP9.59□□□□□ -0.87
SEC13-216ENST00000479868 TRAV2A0A0B4J234 112 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 A8MTW9 85 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 CD28P10747 220 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 CD300EQ496F6 205 aaPredicted RBP9.58□□□□□ -0.88
SEC13-216ENST00000479868 PCP2Q8IVA1 136 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
SEC13-216ENST00000479868 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.58□□□□□ -0.88
SEC13-216ENST00000479868 K7EMI3 77 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
SEC13-216ENST00000479868 IGKV2D-26A0A0A0MRZ7 120 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 DPM2O94777 84 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 CRYGDP07320 174 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 C2orf66Q6UXQ4 117 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 C12orf54Q6X4T0 127 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 SYT8Q8NBV8 401 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 SCGB3A1Q96QR1 104 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 NIPBLQ6KC79 2804 aaeCLIP9.57□□□□□ -0.88
SEC13-216ENST00000479868 A0A087WX48 190 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 A4D1N5 150 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 CBY3A6NI87 242 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 HTN1P15515 57 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 POLR2KP53803 58 aaKnown RBP9.57□□□□□ -0.88
SEC13-216ENST00000479868 TMEM160Q9NX00 188 aa9.57□□□□□ -0.88
SEC13-216ENST00000479868 PRM2P04554 102 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 FHL3Q13643 280 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 RNASE8Q8TDE3 154 aaKnown RBP9.56□□□□□ -0.88
SEC13-216ENST00000479868 SPXQ9BT56 116 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 ZNF256Q9Y2P7 627 aaPredicted RBP9.56□□□□□ -0.88
SEC13-216ENST00000479868 TRGV11A0A075B6L2 103 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 ZNF56Q15929 161 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 ZNF876PQ49A33 203 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 ZC2HC1BQ5TFG8 222 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 GTSCR1Q86UQ5 136 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 CITED2Q99967 270 aaPredicted RBP9.56□□□□□ -0.88
SEC13-216ENST00000479868 TTTY13Q9BZ97 58 aa9.56□□□□□ -0.88
SEC13-216ENST00000479868 CCL24O00175 119 aa9.55□□□□□ -0.88
SEC13-216ENST00000479868 RPL32P62910 135 aaKnown RBP9.55□□□□□ -0.88
SEC13-216ENST00000479868 MORN3Q6PF18 240 aaPredicted RBP9.55□□□□□ -0.88
SEC13-216ENST00000479868 LINC01006Q8NI28 216 aa9.55□□□□□ -0.88
SEC13-216ENST00000479868 SDHAF1A6NFY7 115 aa9.55□□□□□ -0.88
SEC13-216ENST00000479868 M0QY20 66 aa9.55□□□□□ -0.88
SEC13-216ENST00000479868 HECTD1Q9ULT8 2610 aa9.54□□□□□ -0.88
SEC13-216ENST00000479868 TRAV12-1A0A0B4J245 112 aa9.54□□□□□ -0.88
SEC13-216ENST00000479868 RNASE1P07998 156 aaKnown RBP9.54□□□□□ -0.88
SEC13-216ENST00000479868 NEXN-AS1Q8NBZ9 246 aa9.54□□□□□ -0.88
SEC13-216ENST00000479868 SPAG8Q99932 426 aaPredicted RBP9.54□□□□□ -0.88
SEC13-216ENST00000479868 COX11Q9Y6N1 276 aa9.54□□□□□ -0.88
SEC13-216ENST00000479868 ZFP2Q6ZN57 461 aa9.53□□□□□ -0.88
SEC13-216ENST00000479868 VCYO14598 125 aa9.53□□□□□ -0.88
SEC13-216ENST00000479868 TMEM97Q5BJF2 176 aa9.53□□□□□ -0.88
SEC13-216ENST00000479868 ERASQ7Z444 233 aa9.53□□□□□ -0.88
SEC13-216ENST00000479868 BAALCQ8WXS3 180 aa9.53□□□□□ -0.88
SEC13-216ENST00000479868 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms