RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SRXN1Q9BYN0 137 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 DAZ1Q9NQZ3 744 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 INTS1Q8N201 2190 aaKnown RBP3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 H7BZZ5 65 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 I3L3M4 83 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 GNLYP22749 145 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 XCL1P47992 114 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 ADORA2A-AS1P86434 159 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 FAM223AQ8IWN6 122 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 XCL2Q9UBD3 114 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV3OR16-10A0A075B7F0 116 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 TRBV7-6A0A0J9YX20 115 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 FAM223BA6NKX1 122 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 SAA2P0DJI9 122 aaPredicted RBP3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 PVRIGQ6DKI7 326 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 IGFL2Q6UWQ7 119 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 TMEM141Q96I45 108 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 UBE2D4Q9Y2X8 147 aa3.81□□□□□ -1.8
TMEM39A-206ENST00000473684 SAA1P0DJI8 122 aaPredicted RBP3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 DAZ2Q13117 558 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 C10orf25Q5T742 122 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 ATP5EP2Q5VTU8 51 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 STHQ8IWL8 128 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 DAZ3Q9NR90 486 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV4-4A0A075B6R2 117 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 PLAC8L1A1L4L8 177 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 NDUFC1O43677 76 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 PPP1R17O96001 155 aa3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 RNASE6Q93091 150 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 MRPL36Q9P0J6 103 aaKnown RBP3.8□□□□□ -1.8
TMEM39A-206ENST00000473684 DNAL4O96015 105 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 FSHBP01225 129 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 CCKP06307 115 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 KLKP1Q107X0 134 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 TMEM30BQ3MIR4 351 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 C20orf197Q8N268 126 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 TMEM167AQ8TBQ9 72 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 DOCK7Q96N67 2140 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 RAI1Q7Z5J4 1906 aaPredicted RBP3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 UTRNP46939 3433 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 M0R381 172 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 COX7A2LO14548 114 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 TIMM17BO60830 172 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 SLPIP03973 132 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV4-34P06331 123 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 LYZP61626 148 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 WT1-ASQ06250 92 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 ZNF575Q86XF7 245 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 TMEM61Q8N0U2 210 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 TIMM17AQ99595 171 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 CENPFP49454 3210 aa3.79□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV1OR21-1A0A087WYE8 117 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 IGIPA6NJ69 53 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 LMO7DNF2Z398 122 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 MRPL55Q7Z7F7 128 aaKnown RBP3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 DCTN5Q9BTE1 182 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 FER1L5A0AVI2 2057 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV3-20A0A0C4DH32 117 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 A0A0J9YXY3 114 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 H3BRN7 92 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 ZNF876PQ49A33 203 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 LYPD5Q6UWN5 251 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 IMMP1LQ96LU5 166 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 RNF7Q9UBF6 113 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 MED12Q93074 2177 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 IGHV5-51A0A0C4DH38 117 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 IGKV3D-7A0A0C4DH55 119 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 IGLV3-19P01714 112 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 TRGV3P03979 118 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 LOXP28300 417 aaPredicted RBP3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 MIAQ16674 131 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 MPLKIPQ8TAP9 179 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 DEFB126Q9BYW3 111 aa3.78□□□□□ -1.8
TMEM39A-206ENST00000473684 TRAV7A0A075B6U4 112 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 A0A087WVE0 104 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 CGB1A6NKQ9 187 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 CCL21O00585 134 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 NXPH4O95158 308 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV3-48P01763 117 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 CD59P13987 128 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 ZNF80P51504 273 aaPredicted RBP3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 SNRPD3P62318 126 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 RBM3P98179 157 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 Q6ZSV7 163 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 M0R1W7 72 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 MRPL33O75394 65 aaKnown RBP3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV1-16P04430 117 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 LITAFQ99732 161 aa3.77□□□□□ -1.81
TMEM39A-206ENST00000473684 IGKV3D-15A0A087WSY6 115 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 IGHV1OR15-9A0A0B4J2B8 117 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 TSHBP01222 138 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 CGB3P0DN86 165 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 CGB7P0DN87 165 aa3.76□□□□□ -1.81
TMEM39A-206ENST00000473684 SAA4P35542 130 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms