RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 LINC00315P59091 139 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 S100A12P80511 92 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 DNLZQ5SXM8 178 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 RASL10AQ92737 203 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 C18orf15Q96N68 181 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 KIF25-AS1Q9Y6Z4 181 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 NXPH4O95158 308 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 PPBPP02775 128 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 MED14OSP0DP75 135 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 ZNF876PQ49A33 203 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 TRPT1Q86TN4 253 aaKnown RBP4.55□□□□□ -1.68
CLK1-210ENST00000473565 TMEM208Q9BTX3 173 aa4.55□□□□□ -1.68
CLK1-210ENST00000473565 CMYA5Q8N3K9 4069 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 DEFB125Q8N687 156 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 C19orf73Q9NVV2 129 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 IGLV2-18A0A075B6J9 118 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 INSP01308 110 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 BTF3P20290 206 aaKnown RBP4.54□□□□□ -1.68
CLK1-210ENST00000473565 SUMO4Q6EEV6 95 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 TEX43Q6ZNM6 134 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 C1orf158Q8N1D5 194 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 TMEM70Q9BUB7 260 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 NOTCH1P46531 2555 aa4.54□□□□□ -1.68
CLK1-210ENST00000473565 SYS1-DBNDD2H3BUS1 97 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 ZNF56Q15929 161 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 ZNF747Q9BV97 191 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 MRPL16Q9NX20 251 aaKnown RBP4.53□□□□□ -1.68
CLK1-210ENST00000473565 TP73-AS1Q9UF72 201 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 TRGV11A0A075B6L2 103 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 GIG44P09565 113 aaPredicted RBP4.53□□□□□ -1.68
CLK1-210ENST00000473565 BEAN1Q3B7T3 259 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 TMEM158Q8WZ71 300 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 VAMP8Q9BV40 100 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 HBDP02042 147 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 CRYGDP07320 174 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 P0DMU3 169 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 FAM231AP0DMU4 169 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 FAM231CP0DMU5 169 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 TCTAP57738 103 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 PKIAP61925 76 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 Q8N8P6 123 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 MRAP2Q96G30 205 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 Q9UF83 564 aa4.53□□□□□ -1.68
CLK1-210ENST00000473565 TSTD3H0UI37 97 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 SUMO2P61956 95 aaKnown RBP4.52□□□□□ -1.69
CLK1-210ENST00000473565 KRTAP24-1Q3LI83 254 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 C11orf72Q8NBR9 251 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 SYT8Q8NBV8 401 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 CITED1Q99966 193 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 SMIM2Q9BVW6 85 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 MAP1LC3CQ9BXW4 147 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 NXT2Q9NPJ8 142 aaKnown RBP4.52□□□□□ -1.69
CLK1-210ENST00000473565 HSPB8Q9UJY1 196 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 LAMTOR2Q9Y2Q5 125 aa4.52□□□□□ -1.69
CLK1-210ENST00000473565 DDTP30046 118 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 SPATA45Q537H7 98 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 MORN3Q6PF18 240 aaPredicted RBP4.51□□□□□ -1.69
CLK1-210ENST00000473565 ZNF705AQ6ZN79 300 aaPredicted RBP4.51□□□□□ -1.69
CLK1-210ENST00000473565 Q6ZSN1 163 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 CSTL1Q9H114 145 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 KIR2DL5BA0A0G2JN68 375 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 KIR2DL5BA0A0G2JPC4 375 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 IGLL1P15814 213 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 ZNF415Q09FC8 603 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 KIR2DL5AQ8N109 375 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 ANK2Q01484 3957 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 FCER1GP30273 86 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 LAGE3Q14657 143 aa4.51□□□□□ -1.69
CLK1-210ENST00000473565 M0QY20 66 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 M0R2P5 195 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 NUDT3O95989 172 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 IGHV3-53P01767 116 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 NUTF2P61970 127 aaKnown RBP4.5□□□□□ -1.69
CLK1-210ENST00000473565 POM121L12Q8N7R1 296 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 IFI27L1Q96BM0 104 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 C14orf144Q96I85 54 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 NBEAL1Q6ZS30 2694 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 TRGV1A0A0A0MS02 117 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 SDHAF1A6NFY7 115 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 ST20Q9HBF5 79 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 DKK2Q9UBU2 259 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 LINC01546A6NGU7 62 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 EMP1P54849 157 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 LINC01545Q5VT33 79 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 CFAP126Q5VTH2 177 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 Q6ZTI0 123 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 PRIMA1Q86XR5 153 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 CLUHP3Q96NS8 147 aa4.5□□□□□ -1.69
CLK1-210ENST00000473565 C9orf66Q5T8R8 295 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 PET117Q6UWS5 81 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 RNASE8Q8TDE3 154 aaKnown RBP4.49□□□□□ -1.69
CLK1-210ENST00000473565 C20orf78Q9BR46 151 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 NOP10Q9NPE3 64 aaKnown RBP4.49□□□□□ -1.69
CLK1-210ENST00000473565 TRAV9-2A0A087WT02 112 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 C20orf202A1L168 122 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 PRSS47A8MTI9 375 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 PRSS1P07477 247 aa4.49□□□□□ -1.69
CLK1-210ENST00000473565 POLR2KP53803 58 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms