RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 UMAD1C9J7I0 102 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 J3QLW9 94 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 K7EM74 188 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 NDUFC1O43677 76 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 CKS2P33552 79 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 KRTAP6-3Q3LI67 103 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 SOSTDC1Q6X4U4 206 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 SPATA12Q7Z6I5 190 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 C15orf56Q8N910 161 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 CMTM2Q8TAZ6 248 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 ZCCHC13Q8WW36 166 aaKnown RBP1.92□□□□□ -2.1
CD46-213ENST00000471987 AQP3Q92482 292 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 SCGB3A1Q96QR1 104 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 FGF23Q9GZV9 251 aaPredicted RBP1.92□□□□□ -2.1
CD46-213ENST00000471987 ASH1LQ9NR48 2969 aaKnown RBP1.92□□□□□ -2.1
CD46-213ENST00000471987 PIEZO1Q92508 2521 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 TANC2Q9HCD6 1990 aa1.92□□□□□ -2.1
CD46-213ENST00000471987 CRB1P82279 1406 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 EDC4Q6P2E9 1401 aaKnown RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 NFAT5O94916 1531 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 TNS1Q9HBL0 1735 aaKnown RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 ZFC3H1O60293 1989 aaKnown RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 PLXNA3P51805 1871 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 ANKRD36CQ5JPF3 1778 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 USP54Q70EL1 1684 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 ALS2Q96Q42 1657 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CDC42BPGQ6DT37 1551 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 IGLV1-50A0A075B6I6 118 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 IGHV3-43A0A0B4J1X8 118 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 TRAV2A0A0B4J234 112 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 IGHV3-66A0A0C4DH42 116 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 SNRPGP15A8MWD9 76 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CCL16O15467 120 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 IGHV3-7P01780 117 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CCKP06307 115 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CXCL8P10145 99 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 PTHLHP12272 177 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 PIPP12273 146 aaPredicted RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 TSPEAR-AS2P59090 65 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 SNRPFP62306 86 aaKnown RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 INSL4Q14641 139 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 MRPL51Q4U2R6 128 aaKnown RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 CFAP126Q5VTH2 177 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 Q6ZQT7 251 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 TMEM136Q6ZRR5 245 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 DEFB132Q7Z7B7 95 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 OR8B3Q8NGG8 313 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CLDND2Q8NHS1 167 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CLEC2BQ92478 149 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 OR8B2Q96RD0 313 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 CXCL16Q9H2A7 254 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 BDP1A6H8Y1 2624 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 ZNF462Q96JM2 2506 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 EIF2AK4Q9P2K8 1649 aaKnown RBP1.91□□□□□ -2.1
CD46-213ENST00000471987 CENPFP49454 3210 aa1.91□□□□□ -2.1
CD46-213ENST00000471987 DCHS1Q96JQ0 3298 aa1.9□□□□□ -2.1
CD46-213ENST00000471987 CACNA1BQ00975 2339 aa1.9□□□□□ -2.1
CD46-213ENST00000471987 ARHGEF5Q12774 1597 aa1.9□□□□□ -2.1
CD46-213ENST00000471987 SAMD9Q5K651 1589 aa1.9□□□□□ -2.1
CD46-213ENST00000471987 MED12LQ86YW9 2145 aa1.9□□□□□ -2.1
CD46-213ENST00000471987 DSCAMO60469 2012 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 TET2Q6N021 2002 aaPredicted RBP1.9□□□□□ -2.11
CD46-213ENST00000471987 SLX4Q8IY92 1834 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 IGLV3-9A0A075B6K5 115 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 IGHV5-51A0A0C4DH38 117 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 A0A0D9SFI3 127 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 IGHV7-4-1A0A0J9YVY3 117 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 ACYP1P07311 99 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 SMIM13P0DJ93 91 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 IGHV3-30-3P0DP02 117 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 FXYD7P58549 80 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 DYNLT1P63172 113 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 Q1T7F1 81 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 MPV17LQ2QL34 196 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 PSMG4Q5JS54 123 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 ZFAND2AQ8N6M9 145 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 PFN4Q8NHR9 129 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 LINC00467Q9BRT7 94 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 C11orf1Q9H5F2 150 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 RPP21Q9H633 154 aaKnown RBP1.9□□□□□ -2.11
CD46-213ENST00000471987 C8orf17Q9NRJ1 99 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 MRPL35Q9NZE8 188 aaKnown RBP1.9□□□□□ -2.11
CD46-213ENST00000471987 PHLDA3Q9Y5J5 127 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 USP24Q9UPU5 2620 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 MGAMO43451 1857 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 ANKRD11Q6UB99 2663 aaPredicted RBP1.9□□□□□ -2.11
CD46-213ENST00000471987 NAV2Q8IVL1 2488 aa1.9□□□□□ -2.11
CD46-213ENST00000471987 LAMA3Q16787 3333 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 TEP1Q99973 2627 aaKnown RBP1.89□□□□□ -2.11
CD46-213ENST00000471987 TSC2P49815 1807 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 CLTCL1P53675 1640 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 IGHV3-21A0A0B4J1V1 117 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 A0A1W2PQD3 144 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 F2Z2F3 143 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 K7ERS5 55 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 BCE1O60756 84 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 NPYP01303 97 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 ASAH2BP0C7U1 165 aa1.89□□□□□ -2.11
CD46-213ENST00000471987 PIRTP0C851 137 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms