RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 FAM19A2Q8N3H0 131 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 NRACQ8N912 160 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 SPXQ9BT56 116 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 MAP1LC3AQ9H492 121 aa18.83■□□□□ 0.61
U2AF1-208ENST00000471250 IFI27P40305 119 aaPredicted RBP18.82■□□□□ 0.6
U2AF1-208ENST00000471250 PIK3CD-AS1Q5SR53 167 aa18.82■□□□□ 0.6
U2AF1-208ENST00000471250 FA2HQ7L5A8 372 aa18.82■□□□□ 0.6
U2AF1-208ENST00000471250 CSTL1Q9H114 145 aa18.82■□□□□ 0.6
U2AF1-208ENST00000471250 FBN1P35555 2871 aaKnown RBP18.81■□□□□ 0.6
U2AF1-208ENST00000471250 VWFP04275 2813 aa18.8■□□□□ 0.6
U2AF1-208ENST00000471250 A0A087WWL8 130 aa18.8■□□□□ 0.6
U2AF1-208ENST00000471250 PRSS47A8MTI9 375 aa18.8■□□□□ 0.6
U2AF1-208ENST00000471250 CRYGDP07320 174 aa18.8■□□□□ 0.6
U2AF1-208ENST00000471250 PYY3Q5JQD4 70 aa18.8■□□□□ 0.6
U2AF1-208ENST00000471250 AP5S1Q9NUS5 200 aa18.79■□□□□ 0.6
U2AF1-208ENST00000471250 Q6ZWC4 215 aa18.79■□□□□ 0.6
U2AF1-208ENST00000471250 IL17DQ8TAD2 202 aa18.79■□□□□ 0.6
U2AF1-208ENST00000471250 RNASE8Q8TDE3 154 aaKnown RBP18.79■□□□□ 0.6
U2AF1-208ENST00000471250 ZNF705AQ6ZN79 300 aaPredicted RBP18.78■□□□□ 0.6
U2AF1-208ENST00000471250 TMEM263Q8WUH6 116 aaKnown RBP18.78■□□□□ 0.6
U2AF1-208ENST00000471250 RASL10AQ92737 203 aa18.78■□□□□ 0.6
U2AF1-208ENST00000471250 C12orf57Q99622 126 aa18.78■□□□□ 0.6
U2AF1-208ENST00000471250 IGHV1-24A0A0C4DH33 117 aa18.77■□□□□ 0.6
U2AF1-208ENST00000471250 JOSD1Q15040 202 aaPredicted RBP18.76■□□□□ 0.59
U2AF1-208ENST00000471250 NXT2Q9NPJ8 142 aaKnown RBP18.76■□□□□ 0.59
U2AF1-208ENST00000471250 LINC01546A6NGU7 62 aa18.76■□□□□ 0.59
U2AF1-208ENST00000471250 PMCHL1Q16048 86 aa18.76■□□□□ 0.59
U2AF1-208ENST00000471250 FAM74A4Q5TZK3 123 aa18.76■□□□□ 0.59
U2AF1-208ENST00000471250 SUMO4Q6EEV6 95 aa18.76■□□□□ 0.59
U2AF1-208ENST00000471250 PPP1R17O96001 155 aa18.75■□□□□ 0.59
U2AF1-208ENST00000471250 IGLV2-18A0A075B6J9 118 aa18.74■□□□□ 0.59
U2AF1-208ENST00000471250 A8MWV9 139 aa18.74■□□□□ 0.59
U2AF1-208ENST00000471250 OXLD1Q5BKU9 147 aa18.74■□□□□ 0.59
U2AF1-208ENST00000471250 Q8N8P6 123 aa18.74■□□□□ 0.59
U2AF1-208ENST00000471250 NDUFAF3Q9BU61 184 aa18.74■□□□□ 0.59
U2AF1-208ENST00000471250 NOTCH3Q9UM47 2321 aa18.74■□□□□ 0.59
U2AF1-208ENST00000471250 F5H697 171 aa18.73■□□□□ 0.59
U2AF1-208ENST00000471250 RPL39LQ96EH5 51 aaKnown RBP18.73■□□□□ 0.59
U2AF1-208ENST00000471250 C16orf74Q96GX8 76 aa18.73■□□□□ 0.59
U2AF1-208ENST00000471250 C20orf78Q9BR46 151 aa18.73■□□□□ 0.59
U2AF1-208ENST00000471250 MRPL16Q9NX20 251 aaKnown RBP18.73■□□□□ 0.59
U2AF1-208ENST00000471250 KIR2DL5BA0A0G2JN68 375 aa18.72■□□□□ 0.59
U2AF1-208ENST00000471250 KIR2DL5BA0A0G2JPC4 375 aa18.72■□□□□ 0.59
U2AF1-208ENST00000471250 ZNF56Q15929 161 aa18.72■□□□□ 0.59
U2AF1-208ENST00000471250 KIR2DL5AQ8N109 375 aa18.72■□□□□ 0.59
U2AF1-208ENST00000471250 KIR2DL5BQ8NHK3 375 aa18.72■□□□□ 0.59
U2AF1-208ENST00000471250 MAST4O15021 2626 aa18.71■□□□□ 0.59
U2AF1-208ENST00000471250 RRN3P1Q2M238 152 aa18.71■□□□□ 0.59
U2AF1-208ENST00000471250 UFSP1Q6NVU6 142 aa18.71■□□□□ 0.59
U2AF1-208ENST00000471250 SUMO2P61956 95 aaKnown RBP18.7■□□□□ 0.58
U2AF1-208ENST00000471250 SMIM2Q9BVW6 85 aa18.69■□□□□ 0.58
U2AF1-208ENST00000471250 PLAC8L1A1L4L8 177 aa18.69■□□□□ 0.58
U2AF1-208ENST00000471250 RS1O15537 224 aa18.69■□□□□ 0.58
U2AF1-208ENST00000471250 EGFEM1PQ0D2K5 195 aa18.69■□□□□ 0.58
U2AF1-208ENST00000471250 DAZ2Q13117 558 aaKnown RBP18.69■□□□□ 0.58
U2AF1-208ENST00000471250 CFAP126Q5VTH2 177 aa18.69■□□□□ 0.58
U2AF1-208ENST00000471250 A0A096LNJ9 63 aa18.68■□□□□ 0.58
U2AF1-208ENST00000471250 M0QY20 66 aa18.68■□□□□ 0.58
U2AF1-208ENST00000471250 LEPROTL1O95214 131 aa18.68■□□□□ 0.58
U2AF1-208ENST00000471250 APOC4P55056 127 aa18.68■□□□□ 0.58
U2AF1-208ENST00000471250 TRRAPQ9Y4A5 3859 aa18.67■□□□□ 0.58
U2AF1-208ENST00000471250 KRTAP10-11P60412 298 aa18.67■□□□□ 0.58
U2AF1-208ENST00000471250 KRTDAPP60985 99 aa18.67■□□□□ 0.58
U2AF1-208ENST00000471250 EDA2RQ9HAV5 297 aa18.67■□□□□ 0.58
U2AF1-208ENST00000471250 C3orf79P0CE67 100 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 LGALS9BQ3B8N2 356 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 TRGV1A0A0A0MS02 117 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 TRBV6-5A0A0K0K1A5 114 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 RHODO00212 210 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 RPL32P62910 135 aaKnown RBP18.66■□□□□ 0.58
U2AF1-208ENST00000471250 CDPF1Q6NVV7 123 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 ST20Q9HBF5 79 aa18.66■□□□□ 0.58
U2AF1-208ENST00000471250 IGHV4-30-4P0DP06 118 aa18.65■□□□□ 0.58
U2AF1-208ENST00000471250 OVOL2Q9BRP0 275 aa18.65■□□□□ 0.58
U2AF1-208ENST00000471250 NOP10Q9NPE3 64 aaKnown RBP18.65■□□□□ 0.58
U2AF1-208ENST00000471250 NIT2Q9NQR4 276 aa18.65■□□□□ 0.58
U2AF1-208ENST00000471250 ZMAT5Q9UDW3 170 aaKnown RBP18.65■□□□□ 0.58
U2AF1-208ENST00000471250 NACAE9PAV3 2078 aa18.64■□□□□ 0.58
U2AF1-208ENST00000471250 IGHV3-73A0A0B4J1V6 119 aa18.64■□□□□ 0.57
U2AF1-208ENST00000471250 SCGB1D1O95968 90 aa18.64■□□□□ 0.57
U2AF1-208ENST00000471250 HBDP02042 147 aa18.64■□□□□ 0.57
U2AF1-208ENST00000471250 HSPB8Q9UJY1 196 aa18.64■□□□□ 0.57
U2AF1-208ENST00000471250 LINC00173Q6ZV60 143 aa18.63■□□□□ 0.57
U2AF1-208ENST00000471250 SMIM9A6NGZ8 99 aa18.63■□□□□ 0.57
U2AF1-208ENST00000471250 FCER1GP30273 86 aa18.63■□□□□ 0.57
U2AF1-208ENST00000471250 POLR2KP53803 58 aaKnown RBP18.63■□□□□ 0.57
U2AF1-208ENST00000471250 LAGE3Q14657 143 aa18.63■□□□□ 0.57
U2AF1-208ENST00000471250 Q6ZTI0 123 aa18.63■□□□□ 0.57
U2AF1-208ENST00000471250 X6R8D5 127 aa18.63■□□□□ 0.57
U2AF1-208ENST00000471250 H7C1H1 209 aa18.62■□□□□ 0.57
U2AF1-208ENST00000471250 TCAPO15273 167 aa18.62■□□□□ 0.57
U2AF1-208ENST00000471250 ZFP2Q6ZN57 461 aa18.62■□□□□ 0.57
U2AF1-208ENST00000471250 K7EMI3 77 aa18.61■□□□□ 0.57
U2AF1-208ENST00000471250 BTF3P20290 206 aaKnown RBP18.61■□□□□ 0.57
U2AF1-208ENST00000471250 Q8N976 141 aa18.61■□□□□ 0.57
U2AF1-208ENST00000471250 OR4C5Q8NGB2 326 aa18.6■□□□□ 0.57
U2AF1-208ENST00000471250 TMEM70Q9BUB7 260 aa18.6■□□□□ 0.57
U2AF1-208ENST00000471250 STAB1Q9NY15 2570 aa18.59■□□□□ 0.57
U2AF1-208ENST00000471250 TRAV4A0A0B4J268 109 aa18.59■□□□□ 0.57
U2AF1-208ENST00000471250 SDHAF1A6NFY7 115 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms