RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 COQ5Q5HYK3 327 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 C1orf195Q5TG92 126 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 RPS27LQ71UM5 84 aaKnown RBP-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 PLPP5Q8NEB5 264 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 OR13C4Q8NGS5 318 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 OR13D1Q8NGV5 346 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 ATP6V0E2Q8NHE4 81 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 ZNF75CPQ92670 426 aaPredicted RBP-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 IMP4Q96G21 291 aaKnown RBP-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 C8orf76Q96K31 380 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 OR52E6Q96RD3 313 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 PROK2Q9HC23 129 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 BCL2L10Q9HD36 194 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 DYNLRB1Q9NP97 96 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 METTL1Q9UBP6 276 aaKnown RBP-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 EPDR1Q9UM22 224 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 PKIGQ9Y2B9 76 aa-0.24□□□□□ -2.45
UBXN4-207ENST00000471246 IGHV1-58A0A0C4DH39 117 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 M0R233 179 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 NDUFA4O00483 81 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 SFTA3P0C7M3 94 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 MAGEA2P43356 314 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 ATP5G3P48201 142 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 MARCKSL1P49006 195 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 BLVRAP53004 296 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 HADHBP55084 474 aaKnown RBP-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 WFDC2Q14508 124 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 DEFB114Q30KQ6 69 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 LINC01556Q5JQF7 62 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 CLVS2Q5SYC1 327 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 EIF5AL1Q6IS14 154 aaKnown RBP-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 C10orf99Q6UWK7 81 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 GLIPR1L1Q6UWM5 242 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 Q8IYB0 196 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 SYCE1Q8N0S2 351 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 ATOH7Q8N100 152 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 TCTEX1D1Q8N7M0 179 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 MRPL30Q8TCC3 161 aaKnown RBP-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 MYOZ3Q8TDC0 251 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 LINC00467Q9BRT7 94 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 WFDC10AQ9H1F0 79 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 DCSTAMPQ9H295 470 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 OR51I1Q9H343 314 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 TMEM14BQ9NUH8 114 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 SLC39A9Q9NUM3 307 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 C14orf105Q9NVL8 296 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 MRPL27Q9P0M9 148 aaKnown RBP-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 C3orf18Q9UK00 162 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 BOKQ9UMX3 212 aaPredicted RBP-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 TNFSF18Q9UNG2 199 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 GINS2Q9Y248 185 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 SLC35A3Q9Y2D2 325 aa-0.25□□□□□ -2.45
UBXN4-207ENST00000471246 A0A087X0T9 212 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 LINC00959A0A1B0GUT2 108 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 A0A1B0GV50 99 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 FAM25EA8MYX2 175 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 CCL22O00626 93 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 TCRBP04435 133 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 UCHL3P15374 230 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 FOXA3P55318 350 aaPredicted RBP-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 DSCR4P56555 118 aaPredicted RBP-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 ARF6P62330 175 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 HIST3H2BBQ8N257 126 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 C5orf56Q8N8D9 126 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 OR52R1Q8NGF1 315 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 DYNLRB2Q8TF09 96 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 H1FXQ92522 213 aaKnown RBP-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 LEAP2Q969E1 77 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 GPR146Q96CH1 333 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 MALSU1Q96EH3 234 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 C2orf50Q96LR7 162 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 TSPAN32Q96QS1 320 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 NIPSNAP1Q9BPW8 284 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 C7orf50Q9BRJ6 194 aaKnown RBP-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 RNF122Q9H9V4 155 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 OSTCQ9NRP0 149 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 PLEKHJ1Q9NW61 149 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 NHP2Q9NX24 153 aaKnown RBP-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 TAS2R7Q9NYW3 318 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 ERGIC3Q9Y282 383 aa-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.26□□□□□ -2.45
UBXN4-207ENST00000471246 KTN1Q86UP2 1357 aaKnown RBP-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 TRAV9-1A0A075B6T8 112 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 IGLV3-32A0A0A0MS00 114 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 IQCF5A8MTL0 148 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 TMEM14DPA8MWL7 114 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 ATP6V1G2-DDX39BF2Z307 99 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 K7EQZ3 153 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 NDUFA2O43678 99 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 OCMP0CE72 109 aaPredicted RBP-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 COX5BP10606 129 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 SPRR1BP22528 89 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 PHBP35232 272 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 SPINT3P49223 89 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 UBE2G2P60604 165 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 NAA20P61599 178 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 UBE2D2P62837 147 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 CCL8P80075 99 aa-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 MLLT11Q13015 90 aaPredicted RBP-0.27□□□□□ -2.45
UBXN4-207ENST00000471246 PMAIP1Q13794 54 aa-0.27□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms