RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CFTRP13569 1480 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 WDR7Q9Y4E6 1490 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 BCORL1Q5H9F3 1711 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 DLEC1Q9Y238 1755 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 TRAV12-3A0A0B4J271 114 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 TCRBV3S1A0A5B6 114 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 A6NIN4 97 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 SNCGO76070 127 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 NDUFB6O95139 128 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 PIPP12273 146 aaPredicted RBP0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 UBE2G1P62253 170 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 ZNF56Q15929 161 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 C9orf116Q5BN46 136 aaPredicted RBP0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 Q6ZS92 163 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 NDUFA11Q86Y39 141 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 TSKUQ8WUA8 353 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 C10orf82Q8WW14 230 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 LSM10Q969L4 123 aaKnown RBP0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 TMEM141Q96I45 108 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 AGPAT4-IT1Q9H0P7 198 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 RERGLQ9H628 205 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 ASCC3Q8N3C0 2202 aaKnown RBP0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 COL6A6A6NMZ7 2263 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 BLMP54132 1417 aaPredicted RBP0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 NAIPQ13075 1403 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 EIF4G3O43432 1585 aaKnown RBP0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 TEX49A0A1B0GTD5 131 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 MIF4GDA9UHW6 222 aaKnown RBP0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 AKAIN1P0CW23 69 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 FGF7P21781 194 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 Q6AWC8 147 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 RPL7L1Q6DKI1 246 aaKnown RBP0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 C10orf99Q6UWK7 81 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 CYP2G1PQ6ZSU1 146 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 SPTSSBQ8NFR3 76 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 PPP1R1CQ8WVI7 109 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 COPS9Q8WXC6 57 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 PLAC4Q8WY50 150 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 PP6455Q8WZ26 134 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 TMEM203Q969S6 136 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 NAA60Q9H7X0 242 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 SCN3BQ9NY72 215 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 SERP1Q9Y6X1 66 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 ZNF142P52746 1687 aaPredicted RBP0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 CITO14578 2027 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 DAPK1P53355 1430 aa0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 SMG6Q86US8 1419 aaKnown RBP0.55□□□□□ -2.32
GTF3C3-209ENST00000466862 ZNF518AQ6AHZ1 1483 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 CUL7Q14999 1698 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 QRICH2Q9H0J4 1663 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 MCRIP1C9JLW8 97 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 F6UZH7 168 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 SNAPC5O75971 98 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 LY6G6CO95867 125 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 BTG2P78543 158 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 INSL4Q14641 139 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 C20orf197Q8N268 126 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 Q8N8P6 123 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 RPRMQ9NS64 109 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 COA4Q9NYJ1 87 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 GNG8Q9UK08 70 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 LAMB1P07942 1786 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 ATG2AQ2TAZ0 1938 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 A2ML1A8K2U0 1454 aa0.54□□□□□ -2.32
GTF3C3-209ENST00000466862 ROS1P08922 2347 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 RBBP6Q7Z6E9 1792 aaKnown RBP0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 AFDNP55196 1824 aaKnown RBP0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 IFNGP01579 166 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 S100A1P23297 94 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 CBLN1P23435 193 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 SPINT3P49223 89 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 UBE2D1P51668 147 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 RBM3P98179 157 aaKnown RBP0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 KLKP1Q107X0 134 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 CATR1Q13166 79 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 Q56UQ5 140 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 BET1LQ9NYM9 111 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 CASKIN1Q8WXD9 1431 aa0.53□□□□□ -2.32
GTF3C3-209ENST00000466862 MYOM2P54296 1465 aa0.53□□□□□ -2.33
GTF3C3-209ENST00000466862 SPAG17Q6Q759 2223 aa0.53□□□□□ -2.33
GTF3C3-209ENST00000466862 FAM135AQ9P2D6 1515 aa0.53□□□□□ -2.33
GTF3C3-209ENST00000466862 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.33
GTF3C3-209ENST00000466862 NRXN2Q9P2S2 1712 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 LAMA4Q16363 1823 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 SPTBP11277 2137 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 TRBV10-3A0A0K0K1G6 114 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 CLPSL1A2RUU4 121 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 K7EIL1 84 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 APOC4-APOC2K7ER74 178 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 CORTO00230 105 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 IFNA17P01571 189 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 APOC2P02655 101 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 CCL3L1P16619 93 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 GNG4P50150 75 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 FXYD6P3P58550 94 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 TPPP2P59282 170 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 ELOF1P60002 83 aaKnown RBP0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 SSBP1Q04837 148 aaKnown RBP0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 WHAMMP3Q1A5X7 153 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 SPINK13Q1W4C9 94 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms