RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
PTPRN-210ENST00000460801 STPG4Q8N801 248 aa10.27□□□□□ -0.77
PTPRN-210ENST00000460801 LINC01006Q8NI28 216 aa10.27□□□□□ -0.77
PTPRN-210ENST00000460801 MAP6D1Q9H9H5 199 aa10.27□□□□□ -0.77
PTPRN-210ENST00000460801 ZMAT5Q9UDW3 170 aaKnown RBP10.27□□□□□ -0.77
PTPRN-210ENST00000460801 FASNP49327 2511 aaKnown RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 RBMY1BA6NDE4 496 aaKnown RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 RBMY1EA6NEQ0 496 aaKnown RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 NUDT3O95989 172 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 RBMY1DP0C7P1 496 aaKnown RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 RPL32P62910 135 aaKnown RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 ZNF124Q15973 351 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 SYT8Q8NBV8 401 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 A0A087WWL8 130 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 CCL24O00175 119 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 HINT1P49773 126 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
PTPRN-210ENST00000460801 SPAG8Q99932 426 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 ZNF256Q9Y2P7 627 aaPredicted RBP10.26□□□□□ -0.77
PTPRN-210ENST00000460801 TRGV11A0A075B6L2 103 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 A0A1W2PRX2 142 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 LINC00469Q8N7U9 141 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 TMEM160Q9NX00 188 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 WNK1Q9H4A3 2382 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 TRAV25A0A0B4J276 109 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 FGF6P10767 208 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 TOMM6Q96B49 74 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 CITED2Q99967 270 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-210ENST00000460801 CSTL1Q9H114 145 aa10.25□□□□□ -0.77
PTPRN-210ENST00000460801 SETD2Q9BYW2 2564 aaPredicted RBP10.25□□□□□ -0.77
PTPRN-210ENST00000460801 GCN1Q92616 2671 aaKnown RBP10.25□□□□□ -0.77
PTPRN-210ENST00000460801 CRYGDP07320 174 aa10.24□□□□□ -0.77
PTPRN-210ENST00000460801 POLR2KP53803 58 aaKnown RBP10.24□□□□□ -0.77
PTPRN-210ENST00000460801 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
PTPRN-210ENST00000460801 TSSC4Q9Y5U2 329 aaPredicted RBP10.24□□□□□ -0.77
PTPRN-210ENST00000460801 CBY3A6NI87 242 aa10.23□□□□□ -0.77
PTPRN-210ENST00000460801 F5H697 171 aa10.23□□□□□ -0.77
PTPRN-210ENST00000460801 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.23□□□□□ -0.77
PTPRN-210ENST00000460801 HILS1P60008 231 aa10.23□□□□□ -0.77
PTPRN-210ENST00000460801 ZNF418Q8TF45 676 aaPredicted RBP10.23□□□□□ -0.77
PTPRN-210ENST00000460801 IGKCP01834 107 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 MPV17L2Q567V2 206 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 C2orf91Q6ZV80 131 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 DPM2O94777 84 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 ZNF876PQ49A33 203 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 FAM74A4Q5TZK3 123 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 CLUHP3Q96NS8 147 aa10.22□□□□□ -0.77
PTPRN-210ENST00000460801 CUBNO60494 3623 aa10.21□□□□□ -0.77
PTPRN-210ENST00000460801 A0A087WX48 190 aa10.21□□□□□ -0.77
PTPRN-210ENST00000460801 ODF3L2Q3SX64 289 aa10.21□□□□□ -0.77
PTPRN-210ENST00000460801 C2orf66Q6UXQ4 117 aa10.21□□□□□ -0.77
PTPRN-210ENST00000460801 SCGB3A1Q96QR1 104 aa10.21□□□□□ -0.77
PTPRN-210ENST00000460801 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.77
PTPRN-210ENST00000460801 HECTD1Q9ULT8 2610 aa10.21□□□□□ -0.78
PTPRN-210ENST00000460801 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.78
PTPRN-210ENST00000460801 M0QY20 66 aa10.21□□□□□ -0.78
PTPRN-210ENST00000460801 VCYO14598 125 aa10.21□□□□□ -0.78
PTPRN-210ENST00000460801 DLEU1O43261 78 aa10.21□□□□□ -0.78
PTPRN-210ENST00000460801 NEGR1Q7Z3B1 354 aa10.21□□□□□ -0.78
PTPRN-210ENST00000460801 HIVEP2P31629 2446 aa10.2□□□□□ -0.78
PTPRN-210ENST00000460801 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
PTPRN-210ENST00000460801 MORN3Q6PF18 240 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-210ENST00000460801 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
PTPRN-210ENST00000460801 SDHAF1A6NFY7 115 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 TCTAP57738 103 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 ZNF56Q15929 161 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 BVES-AS1Q5T3Y7 98 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 C12orf54Q6X4T0 127 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 SMR3AQ99954 134 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 NDUFA7O95182 113 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 HTN1P15515 57 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 ZNF25P17030 456 aaPredicted RBP10.19□□□□□ -0.78
PTPRN-210ENST00000460801 ERASQ7Z444 233 aa10.19□□□□□ -0.78
PTPRN-210ENST00000460801 G0S2P27469 103 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 ZFP2Q6ZN57 461 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 NEXN-AS1Q8NBZ9 246 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 KIR2DL4Q99706 377 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 LINC01549A6NIU2 74 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 H7C1H1 209 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 SIVA1O15304 175 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 NMUP48645 174 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 ZC2HC1BQ5TFG8 222 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 PCP2Q8IVA1 136 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 PTH2Q96A98 100 aa10.18□□□□□ -0.78
PTPRN-210ENST00000460801 IGKV2D-26A0A0A0MRZ7 120 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 F8VRH5 84 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 PRM2P04554 102 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 PLNP26678 52 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 TRPT1Q86TN4 253 aaKnown RBP10.17□□□□□ -0.78
PTPRN-210ENST00000460801 JMJD8Q96S16 334 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 TMEM208Q9BTX3 173 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 CYSLTR1Q9Y271 337 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 ADARB2-AS1A8MUL3 147 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 M0R2P5 195 aa10.17□□□□□ -0.78
PTPRN-210ENST00000460801 INSP01308 110 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms