RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
CDK11A-209ENST00000460465 PMCHL1Q16048 86 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 SYT8Q8NBV8 401 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 LINC00467Q9BRT7 94 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 JPT2Q9H910 190 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 LAMTOR2Q9Y2Q5 125 aa12.66□□□□□ -0.38
CDK11A-209ENST00000460465 TCAPO15273 167 aa12.65□□□□□ -0.38
CDK11A-209ENST00000460465 MGPP08493 103 aa12.65□□□□□ -0.38
CDK11A-209ENST00000460465 FA2HQ7L5A8 372 aa12.65□□□□□ -0.38
CDK11A-209ENST00000460465 C1orf158Q8N1D5 194 aa12.65□□□□□ -0.39
CDK11A-209ENST00000460465 ZNF664Q8N3J9 261 aa12.65□□□□□ -0.39
CDK11A-209ENST00000460465 MRAP2Q96G30 205 aa12.65□□□□□ -0.39
CDK11A-209ENST00000460465 KIF25-AS1Q9Y6Z4 181 aa12.65□□□□□ -0.39
CDK11A-209ENST00000460465 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
CDK11A-209ENST00000460465 DEFB125Q8N687 156 aa12.64□□□□□ -0.39
CDK11A-209ENST00000460465 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
CDK11A-209ENST00000460465 ZNF747Q9BV97 191 aa12.64□□□□□ -0.39
CDK11A-209ENST00000460465 MAP1LC3AQ9H492 121 aa12.64□□□□□ -0.39
CDK11A-209ENST00000460465 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 NRACQ8N912 160 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 GIG44P09565 113 aaPredicted RBP12.63□□□□□ -0.39
CDK11A-209ENST00000460465 SMIM17P0DL12 118 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 ZNF415Q09FC8 603 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 MCRIP2Q9BUT9 160 aaKnown RBP12.63□□□□□ -0.39
CDK11A-209ENST00000460465 ATRQ13535 2644 aa12.63□□□□□ -0.39
CDK11A-209ENST00000460465 A0A087WWL8 130 aa12.62□□□□□ -0.39
CDK11A-209ENST00000460465 WFDC9Q8NEX5 89 aa12.62□□□□□ -0.39
CDK11A-209ENST00000460465 IGLL1P15814 213 aa12.62□□□□□ -0.39
CDK11A-209ENST00000460465 LINC00315P59091 139 aa12.62□□□□□ -0.39
CDK11A-209ENST00000460465 ZNF876PQ49A33 203 aa12.62□□□□□ -0.39
CDK11A-209ENST00000460465 POM121L12Q8N7R1 296 aa12.61□□□□□ -0.39
CDK11A-209ENST00000460465 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
CDK11A-209ENST00000460465 NDUFAF3Q9BU61 184 aa12.61□□□□□ -0.39
CDK11A-209ENST00000460465 VWFP04275 2813 aa12.61□□□□□ -0.39
CDK11A-209ENST00000460465 KRTDAPP60985 99 aa12.6□□□□□ -0.39
CDK11A-209ENST00000460465 MORN3Q6PF18 240 aaPredicted RBP12.6□□□□□ -0.39
CDK11A-209ENST00000460465 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
CDK11A-209ENST00000460465 AZU1P20160 251 aa12.6□□□□□ -0.39
CDK11A-209ENST00000460465 FAM74A4Q5TZK3 123 aa12.6□□□□□ -0.39
CDK11A-209ENST00000460465 RASL10AQ92737 203 aa12.6□□□□□ -0.39
CDK11A-209ENST00000460465 M0R2P5 195 aa12.59□□□□□ -0.39
CDK11A-209ENST00000460465 SCGB1D1O95968 90 aa12.59□□□□□ -0.39
CDK11A-209ENST00000460465 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
CDK11A-209ENST00000460465 C1QTNF4Q9BXJ3 329 aa12.59□□□□□ -0.39
CDK11A-209ENST00000460465 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
CDK11A-209ENST00000460465 CRYGDP07320 174 aa12.58□□□□□ -0.4
CDK11A-209ENST00000460465 GOLT1BQ9Y3E0 138 aa12.58□□□□□ -0.4
CDK11A-209ENST00000460465 C3orf79P0CE67 100 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 SUMO4Q6EEV6 95 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 F5H697 171 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 LEPROTL1O95214 131 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 C12orf54Q6X4T0 127 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 Q8N8P6 123 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 SPXQ9BT56 116 aa12.57□□□□□ -0.4
CDK11A-209ENST00000460465 A0A096LNJ9 63 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 LINC01546A6NGU7 62 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 SHISA2Q6UWI4 295 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 LINC00173Q6ZV60 143 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 WIPF1O43516 503 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 ZNF56Q15929 161 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 RNASE8Q8TDE3 154 aaKnown RBP12.56□□□□□ -0.4
CDK11A-209ENST00000460465 PTH2Q96A98 100 aa12.56□□□□□ -0.4
CDK11A-209ENST00000460465 FBN1P35555 2871 aaKnown RBP12.55□□□□□ -0.4
CDK11A-209ENST00000460465 EREGO14944 169 aa12.55□□□□□ -0.4
CDK11A-209ENST00000460465 MRPL16Q9NX20 251 aaKnown RBP12.55□□□□□ -0.4
CDK11A-209ENST00000460465 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
CDK11A-209ENST00000460465 PIK3CD-AS1Q5SR53 167 aa12.55□□□□□ -0.4
CDK11A-209ENST00000460465 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
CDK11A-209ENST00000460465 Q8N976 141 aa12.54□□□□□ -0.4
CDK11A-209ENST00000460465 TMEM263Q8WUH6 116 aaKnown RBP12.54□□□□□ -0.4
CDK11A-209ENST00000460465 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
CDK11A-209ENST00000460465 C20orf78Q9BR46 151 aa12.54□□□□□ -0.4
CDK11A-209ENST00000460465 SMIM2Q9BVW6 85 aa12.54□□□□□ -0.4
CDK11A-209ENST00000460465 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
CDK11A-209ENST00000460465 PPP1R17O96001 155 aa12.54□□□□□ -0.4
CDK11A-209ENST00000460465 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
CDK11A-209ENST00000460465 A8MWV9 139 aa12.53□□□□□ -0.4
CDK11A-209ENST00000460465 CIDEAO60543 219 aa12.53□□□□□ -0.4
CDK11A-209ENST00000460465 HBDP02042 147 aa12.53□□□□□ -0.4
CDK11A-209ENST00000460465 ZNF705AQ6ZN79 300 aaPredicted RBP12.53□□□□□ -0.4
CDK11A-209ENST00000460465 HSPB8Q9UJY1 196 aa12.53□□□□□ -0.4
CDK11A-209ENST00000460465 IGHV3-73A0A0B4J1V6 119 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 SNHG12Q9BXW3 62 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 M0QY20 66 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 CFAP126Q5VTH2 177 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 UFSP1Q6NVU6 142 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 TMEM70Q9BUB7 260 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
CDK11A-209ENST00000460465 C16orf74Q96GX8 76 aa12.5□□□□□ -0.41
CDK11A-209ENST00000460465 FCER1GP30273 86 aa12.5□□□□□ -0.41
CDK11A-209ENST00000460465 LAGE3Q14657 143 aa12.5□□□□□ -0.41
CDK11A-209ENST00000460465 SPATA12Q7Z6I5 190 aa12.5□□□□□ -0.41
CDK11A-209ENST00000460465 NOTCH3Q9UM47 2321 aa12.5□□□□□ -0.41
CDK11A-209ENST00000460465 TRGV1A0A0A0MS02 117 aa12.49□□□□□ -0.41
CDK11A-209ENST00000460465 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
CDK11A-209ENST00000460465 OXLD1Q5BKU9 147 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms