RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 SOCS3O14543 225 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 COX6B1P14854 86 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 CKS1BP61024 79 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 POLQO75417 2590 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 A0A1B0GV72 72 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 C19orf84I3L1E1 186 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 MOB4Q9Y3A3 225 aa10.67□□□□□ -0.7
ERCC3-203ENST00000445889 ITPR1Q14643 2758 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 H3BUX3 64 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 SCGB1A1P11684 91 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 FHL3Q13643 280 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 SUMO4Q6EEV6 95 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 C1QTNF4Q9BXJ3 329 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 NOTCH3Q9UM47 2321 aa10.66□□□□□ -0.7
ERCC3-203ENST00000445889 HTN1P15515 57 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 UBE2D1P51668 147 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 LINC00315P59091 139 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 C10orf99Q6UWK7 81 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 RAX2Q96IS3 184 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 A0A0J9YY99 117 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 OVOL1O14753 267 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 SCGB1C2P0DMR2 95 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 KLRB1Q12918 225 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 FAM159AQ6UWV7 190 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 MDFICQ9P1T7 246 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 LENEPQ9Y5L5 61 aa10.65□□□□□ -0.7
ERCC3-203ENST00000445889 TCL1BO95988 128 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 MT-ATP8P03928 68 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 CLUHP3Q96NS8 147 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 SDHAF1A6NFY7 115 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 LINC01619G3V211 115 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 ZNF688P0C7X2 276 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 NBL1P41271 181 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 ZNF580Q9UK33 172 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 CDIP1Q9H305 208 aa10.64□□□□□ -0.71
ERCC3-203ENST00000445889 FLNCQ14315 2725 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV4-61A0A0C4DH41 118 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 CFC1BP0CG36 223 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 CFC1P0CG37 223 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 FAM223BA6NKX1 122 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 NDUFA4O00483 81 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 PRM2P04554 102 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 PMVKQ15126 192 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 FAM223AQ8IWN6 122 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 KIF25-AS1Q9Y6Z4 181 aa10.63□□□□□ -0.71
ERCC3-203ENST00000445889 ADARB2-AS1A8MUL3 147 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 HERVK_113P61574 105 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 KIR2DL4Q99706 377 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV3-73A0A0B4J1V6 119 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV4-39P01824 125 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 CARD19Q96LW7 228 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 DUX5Q96PT3 197 aa10.62□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV1-69DA0A0B4J2H0 117 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV1-69P01742 117 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 ZNF56Q15929 161 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 KLK9Q2XQG4 91 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 C19orf54Q5BKX5 351 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 XGP55808 180 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 UBE2D3P61077 147 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 UBE2D2P62837 147 aa10.61□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV3-30P01768 117 aa10.6□□□□□ -0.71
ERCC3-203ENST00000445889 IGHV3-30-5P0DP03 117 aa10.6□□□□□ -0.71
ERCC3-203ENST00000445889 POLR2KP53803 58 aaKnown RBP10.6□□□□□ -0.71
ERCC3-203ENST00000445889 RNASE13Q5GAN3 156 aaKnown RBP10.6□□□□□ -0.71
ERCC3-203ENST00000445889 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
ERCC3-203ENST00000445889 TRAV26-1A0A087WT03 109 aa10.6□□□□□ -0.71
ERCC3-203ENST00000445889 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
ERCC3-203ENST00000445889 CRIP2P52943 208 aaPredicted RBP10.59□□□□□ -0.71
ERCC3-203ENST00000445889 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
ERCC3-203ENST00000445889 C2CD3Q4AC94 2353 aa10.59□□□□□ -0.71
ERCC3-203ENST00000445889 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
ERCC3-203ENST00000445889 J3QQQ9 107 aa10.59□□□□□ -0.71
ERCC3-203ENST00000445889 VCYO14598 125 aa10.59□□□□□ -0.71
ERCC3-203ENST00000445889 PPP1R17O96001 155 aa10.59□□□□□ -0.71
ERCC3-203ENST00000445889 TRPT1Q86TN4 253 aaKnown RBP10.59□□□□□ -0.71
ERCC3-203ENST00000445889 LGALS3P17931 250 aaKnown RBP10.58□□□□□ -0.72
ERCC3-203ENST00000445889 CEMP1Q6PRD7 247 aaPredicted RBP10.58□□□□□ -0.72
ERCC3-203ENST00000445889 DAZ1Q9NQZ3 744 aaKnown RBP10.58□□□□□ -0.72
ERCC3-203ENST00000445889 BEX4Q9NWD9 120 aaPredicted RBP10.58□□□□□ -0.72
ERCC3-203ENST00000445889 NACAE9PAV3 2078 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.72
ERCC3-203ENST00000445889 P0DMU3 169 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 FAM231AP0DMU4 169 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 FAM231CP0DMU5 169 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 Q6ZUT4 128 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 SLC25A29Q8N8R3 303 aa10.58□□□□□ -0.72
ERCC3-203ENST00000445889 A4D1N5 150 aa10.57□□□□□ -0.72
ERCC3-203ENST00000445889 TEN1Q86WV5 123 aa10.57□□□□□ -0.72
ERCC3-203ENST00000445889 Q8N1Y9 231 aa10.57□□□□□ -0.72
ERCC3-203ENST00000445889 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
ERCC3-203ENST00000445889 A8MWV9 139 aa10.57□□□□□ -0.72
ERCC3-203ENST00000445889 ANKRD29Q8N6D5 301 aa10.57□□□□□ -0.72
ERCC3-203ENST00000445889 Q9UF83 564 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms