RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 ATRQ13535 2644 aa13.67□□□□□ -0.22
CCNA1-202ENST00000440264 GIG44P09565 113 aaPredicted RBP13.66□□□□□ -0.22
CCNA1-202ENST00000440264 C11orf72Q8NBR9 251 aa13.66□□□□□ -0.22
CCNA1-202ENST00000440264 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
CCNA1-202ENST00000440264 HSPB8Q9UJY1 196 aa13.66□□□□□ -0.22
CCNA1-202ENST00000440264 CBY3A6NI87 242 aa13.66□□□□□ -0.22
CCNA1-202ENST00000440264 HBDP02042 147 aa13.66□□□□□ -0.22
CCNA1-202ENST00000440264 STHQ8IWL8 128 aa13.66□□□□□ -0.22
CCNA1-202ENST00000440264 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
CCNA1-202ENST00000440264 CMC4P56277 68 aaPredicted RBP13.65□□□□□ -0.22
CCNA1-202ENST00000440264 C20orf78Q9BR46 151 aa13.65□□□□□ -0.22
CCNA1-202ENST00000440264 WFDC10AQ9H1F0 79 aa13.65□□□□□ -0.22
CCNA1-202ENST00000440264 NACAE9PAV3 2078 aa13.64□□□□□ -0.23
CCNA1-202ENST00000440264 TSTD3H0UI37 97 aa13.64□□□□□ -0.23
CCNA1-202ENST00000440264 INSP01308 110 aa13.64□□□□□ -0.23
CCNA1-202ENST00000440264 PTH2Q96A98 100 aa13.64□□□□□ -0.23
CCNA1-202ENST00000440264 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
CCNA1-202ENST00000440264 A0A087WWL8 130 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 PF4P02776 101 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 MGPP08493 103 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 SUMO2P61956 95 aaKnown RBP13.63□□□□□ -0.23
CCNA1-202ENST00000440264 SUMO4Q6EEV6 95 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 PET117Q6UWS5 81 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 SYT8Q8NBV8 401 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 FCER1GP30273 86 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 ZNF876PQ49A33 203 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 LINC01545Q5VT33 79 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 XCL2Q9UBD3 114 aa13.63□□□□□ -0.23
CCNA1-202ENST00000440264 DDTP30046 118 aa13.62□□□□□ -0.23
CCNA1-202ENST00000440264 PIK3CD-AS1Q5SR53 167 aa13.62□□□□□ -0.23
CCNA1-202ENST00000440264 VAMP8Q9BV40 100 aa13.62□□□□□ -0.23
CCNA1-202ENST00000440264 TRRAPQ9Y4A5 3859 aa13.62□□□□□ -0.23
CCNA1-202ENST00000440264 RPL32P62910 135 aaKnown RBP13.61□□□□□ -0.23
CCNA1-202ENST00000440264 UFSP1Q6NVU6 142 aa13.61□□□□□ -0.23
CCNA1-202ENST00000440264 MORN3Q6PF18 240 aaPredicted RBP13.61□□□□□ -0.23
CCNA1-202ENST00000440264 IL17DQ8TAD2 202 aa13.61□□□□□ -0.23
CCNA1-202ENST00000440264 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
CCNA1-202ENST00000440264 MAJINQ3KP22 176 aa13.6□□□□□ -0.23
CCNA1-202ENST00000440264 ATOH7Q8N100 152 aa13.6□□□□□ -0.23
CCNA1-202ENST00000440264 SMIM17P0DL12 118 aa13.6□□□□□ -0.23
CCNA1-202ENST00000440264 LINC01587Q99440 93 aa13.6□□□□□ -0.23
CCNA1-202ENST00000440264 TRBV6-5A0A0K0K1A5 114 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 M0QY20 66 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 TCAPO15273 167 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 HTN1P15515 57 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 AZU1P20160 251 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 POLR2KP53803 58 aaKnown RBP13.59□□□□□ -0.23
CCNA1-202ENST00000440264 ZNF415Q09FC8 603 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 LAGE3Q14657 143 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 TMEM158Q8WZ71 300 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 MCRIP2Q9BUT9 160 aaKnown RBP13.59□□□□□ -0.23
CCNA1-202ENST00000440264 NOTCH3Q9UM47 2321 aa13.59□□□□□ -0.23
CCNA1-202ENST00000440264 M0R2P5 195 aa13.58□□□□□ -0.23
CCNA1-202ENST00000440264 PPP1R17O96001 155 aa13.58□□□□□ -0.23
CCNA1-202ENST00000440264 EDA2RQ9HAV5 297 aa13.58□□□□□ -0.23
CCNA1-202ENST00000440264 CSNK1G2-AS1Q8NCQ2 148 aa13.58□□□□□ -0.24
CCNA1-202ENST00000440264 TRAV9-2A0A087WT02 112 aa13.57□□□□□ -0.24
CCNA1-202ENST00000440264 K7EMI3 77 aa13.57□□□□□ -0.24
CCNA1-202ENST00000440264 IFI27L1Q96BM0 104 aa13.57□□□□□ -0.24
CCNA1-202ENST00000440264 INSL3P51460 131 aa13.56□□□□□ -0.24
CCNA1-202ENST00000440264 NUTF2P61970 127 aaKnown RBP13.56□□□□□ -0.24
CCNA1-202ENST00000440264 SPATA45Q537H7 98 aa13.56□□□□□ -0.24
CCNA1-202ENST00000440264 FAM74A4Q5TZK3 123 aa13.56□□□□□ -0.24
CCNA1-202ENST00000440264 RNASE8Q8TDE3 154 aaKnown RBP13.56□□□□□ -0.24
CCNA1-202ENST00000440264 NDUFAF3Q9BU61 184 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 IGLL1P15814 213 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 LGALS9BQ3B8N2 356 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 LGALS9CQ6DKI2 356 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 C14orf144Q96I85 54 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 SPXQ9BT56 116 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 CSTL1Q9H114 145 aa13.55□□□□□ -0.24
CCNA1-202ENST00000440264 C20orf202A1L168 122 aa13.54□□□□□ -0.24
CCNA1-202ENST00000440264 IGLC3P0DOY3 106 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 C9orf66Q5T8R8 295 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 PMCHL2Q9BQD1 86 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 ST20Q9HBF5 79 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 TRBV27A0A0K0K1C4 114 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 A8MWV9 139 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 F5H697 171 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 ZNF56Q15929 161 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 ORMDL2Q53FV1 153 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 NEGR1Q7Z3B1 354 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 WFDC9Q8NEX5 89 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 MIEN1Q9BRT3 115 aa13.53□□□□□ -0.24
CCNA1-202ENST00000440264 PLAC8L1A1L4L8 177 aa13.52□□□□□ -0.25
CCNA1-202ENST00000440264 RPL35AP18077 110 aaKnown RBP13.52□□□□□ -0.25
CCNA1-202ENST00000440264 TOMM6Q96B49 74 aa13.52□□□□□ -0.25
CCNA1-202ENST00000440264 SDHAF1A6NFY7 115 aa13.51□□□□□ -0.25
CCNA1-202ENST00000440264 H0Y8G0 127 aa13.51□□□□□ -0.25
CCNA1-202ENST00000440264 ZNF705AQ6ZN79 300 aaPredicted RBP13.51□□□□□ -0.25
CCNA1-202ENST00000440264 Q6ZSN1 163 aa13.51□□□□□ -0.25
CCNA1-202ENST00000440264 hDV102S1A0JD36 115 aa13.5□□□□□ -0.25
CCNA1-202ENST00000440264 RS1O15537 224 aa13.5□□□□□ -0.25
CCNA1-202ENST00000440264 KRTAP24-1Q3LI83 254 aa13.5□□□□□ -0.25
CCNA1-202ENST00000440264 TMEM263Q8WUH6 116 aaKnown RBP13.5□□□□□ -0.25
CCNA1-202ENST00000440264 TMEM208Q9BTX3 173 aa13.5□□□□□ -0.25
CCNA1-202ENST00000440264 MRPL16Q9NX20 251 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms