RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 NIT2Q9NQR4 276 aa10.62□□□□□ -0.71
TNFRSF1A-204ENST00000440083 IGHV3-16A0A0C4DH30 117 aa10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 NXPH4O95158 308 aa10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 LINC00614P0C842 121 aa10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 SMIM17P0DL12 118 aa10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 RPL35AP18077 110 aaKnown RBP10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 MRAP2Q96G30 205 aa10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 RETNQ9HD89 108 aa10.61□□□□□ -0.71
TNFRSF1A-204ENST00000440083 NPYP01303 97 aa10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 MGPP08493 103 aa10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 NUTF2P61970 127 aaKnown RBP10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 FAM19A2Q8N3H0 131 aa10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 FAM110AQ9BQ89 295 aa10.6□□□□□ -0.71
TNFRSF1A-204ENST00000440083 LOC389332A0A1B0GUA5 103 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 CRXO43186 299 aaPredicted RBP10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 SPRY2O43597 315 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 SCGB1D1O95968 90 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 KRTDAPP60985 99 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 Q6ZWC4 215 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 URB1-AS1Q96HZ7 61 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 AP5S1Q9NUS5 200 aa10.59□□□□□ -0.71
TNFRSF1A-204ENST00000440083 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
TNFRSF1A-204ENST00000440083 LINC01587Q99440 93 aa10.58□□□□□ -0.72
TNFRSF1A-204ENST00000440083 TMEM208Q9BTX3 173 aa10.58□□□□□ -0.72
TNFRSF1A-204ENST00000440083 IGHV1-24A0A0C4DH33 117 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 TNFRSF6BO95407 300 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 RBMY1A1P0DJD3 496 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 RBMY1CP0DJD4 496 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 IFI27P40305 119 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 S100A12P80511 92 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 RBMY1FQ15415 496 aaKnown RBP10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 LINC00467Q9BRT7 94 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
TNFRSF1A-204ENST00000440083 NHLRC4P0CG21 123 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF1A-204ENST00000440083 HTN1P15515 57 aa10.56□□□□□ -0.72
TNFRSF1A-204ENST00000440083 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
TNFRSF1A-204ENST00000440083 NXT2Q9NPJ8 142 aaKnown RBP10.56□□□□□ -0.72
TNFRSF1A-204ENST00000440083 XCL2Q9UBD3 114 aa10.56□□□□□ -0.72
TNFRSF1A-204ENST00000440083 MUC4Q99102 2169 aa10.56□□□□□ -0.72
TNFRSF1A-204ENST00000440083 TRAV26-2A0A0B4J265 109 aa10.55□□□□□ -0.72
TNFRSF1A-204ENST00000440083 PCP4L1A6NKN8 68 aa10.55□□□□□ -0.72
TNFRSF1A-204ENST00000440083 LEPROTL1O95214 131 aa10.55□□□□□ -0.72
TNFRSF1A-204ENST00000440083 PPP1R17O96001 155 aa10.55□□□□□ -0.72
TNFRSF1A-204ENST00000440083 GSN-AS1Q9NRJ2 163 aa10.55□□□□□ -0.72
TNFRSF1A-204ENST00000440083 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
TNFRSF1A-204ENST00000440083 GATA1P15976 413 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-204ENST00000440083 MORN3Q6PF18 240 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF1A-204ENST00000440083 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
TNFRSF1A-204ENST00000440083 C1QTNF4Q9BXJ3 329 aa10.54□□□□□ -0.72
TNFRSF1A-204ENST00000440083 GOLT1BQ9Y3E0 138 aa10.54□□□□□ -0.72
TNFRSF1A-204ENST00000440083 C3orf79P0CE67 100 aa10.53□□□□□ -0.72
TNFRSF1A-204ENST00000440083 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
TNFRSF1A-204ENST00000440083 CDPF1Q6NVV7 123 aa10.53□□□□□ -0.72
TNFRSF1A-204ENST00000440083 Q8N8P6 123 aa10.53□□□□□ -0.72
TNFRSF1A-204ENST00000440083 NRACQ8N912 160 aa10.53□□□□□ -0.72
TNFRSF1A-204ENST00000440083 IGHV3OR16-12A0A075B7B8 117 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 A0A087WWL8 130 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 C20orf202A1L168 122 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 F5H697 171 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 GAS8-AS1O95177 125 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 HBDP02042 147 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 BTF3P20290 206 aaKnown RBP10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 APOC4P55056 127 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 ZNF56Q15929 161 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 ZMAT4Q9H898 229 aa10.52□□□□□ -0.73
TNFRSF1A-204ENST00000440083 M0R2P5 195 aa10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 GIG44P09565 113 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 POM121L12Q8N7R1 296 aa10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 SPXQ9BT56 116 aa10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 MAP1LC3CQ9BXW4 147 aa10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 CSTL1Q9H114 145 aa10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 KIF25-AS1Q9Y6Z4 181 aa10.51□□□□□ -0.73
TNFRSF1A-204ENST00000440083 DNAH7Q8WXX0 4024 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 PRSS47A8MTI9 375 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 SUMO4Q6EEV6 95 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 KIR2DL5BQ8NHK3 375 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 C20orf78Q9BR46 151 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 TMEM70Q9BUB7 260 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 SMIM2Q9BVW6 85 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 JPT2Q9H910 190 aa10.5□□□□□ -0.73
TNFRSF1A-204ENST00000440083 A8MWV9 139 aa10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 TSTD3H0UI37 97 aa10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 SUMO2P61956 95 aaKnown RBP10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 PIK3CD-AS1Q5SR53 167 aa10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 C1orf158Q8N1D5 194 aa10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 RASL10AQ92737 203 aa10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 PTH2Q96A98 100 aa10.49□□□□□ -0.73
TNFRSF1A-204ENST00000440083 LINC01546A6NGU7 62 aa10.48□□□□□ -0.73
TNFRSF1A-204ENST00000440083 C11orf72Q8NBR9 251 aa10.48□□□□□ -0.73
TNFRSF1A-204ENST00000440083 RPL39LQ96EH5 51 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 272 ms