RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 LINC00311Q8N616 119 aa3.9□□□□□ -1.79
PTPRK-212ENST00000434424 OR51T1Q8NGJ9 327 aa3.9□□□□□ -1.79
PTPRK-212ENST00000434424 C6orf62Q9GZU0 229 aaPredicted RBP3.9□□□□□ -1.79
PTPRK-212ENST00000434424 OR52A1Q9UKL2 312 aa3.9□□□□□ -1.79
PTPRK-212ENST00000434424 R4GMQ9 66 aa3.9□□□□□ -1.79
PTPRK-212ENST00000434424 TRAV9-1A0A075B6T8 112 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 TCRBV3S1A0A5B6 114 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 TMEM30CPA0ZSE6 113 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 ZNF736B4DX44 427 aaPredicted RBP3.89□□□□□ -1.79
PTPRK-212ENST00000434424 IGLV3-1P01715 115 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 HMGN1P05114 100 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 P0DMU3 169 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 FAM231AP0DMU4 169 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 FAM231CP0DMU5 169 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 RAB14P61106 215 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 CCL20P78556 96 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 DEFB135Q30KP9 77 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 OR8D4Q8NGM9 314 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 OR5C1Q8NGR4 320 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 CANT1Q8WVQ1 401 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 ARL11Q969Q4 196 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 USMG5Q96IX5 58 aa3.89□□□□□ -1.79
PTPRK-212ENST00000434424 ZNF670-ZNF695F2Z2N8 137 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 SLC22A1O15245 554 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 ORC5O43913 435 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 GOLT1AQ6ZVE7 132 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 TOMM6Q96B49 74 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 WFDC10AQ9H1F0 79 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 IL36BQ9NZH7 164 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 PRO0461Q9UI25 63 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 STARD9Q9P2P6 4700 aa3.88□□□□□ -1.79
PTPRK-212ENST00000434424 RYR1P21817 5038 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HUWE1Q7Z6Z7 4374 aaKnown RBP3.87□□□□□ -1.79
PTPRK-212ENST00000434424 AIPO00170 330 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 LEPROTO15243 131 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 IFNA10P01566 189 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 IFNA21P01568 189 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 IFNA17P01571 189 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 IGLV6-57P01721 117 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 PRM2P04554 102 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 SCTP09683 121 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BOP23527 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BBP33778 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 ZNF137PP52743 207 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BDP58876 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BCP62807 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 MIAQ16674 131 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST2H2BEQ16778 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 DEFB114Q30KQ6 69 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-212ENST00000434424 IBA57Q5T440 356 aaKnown RBP3.87□□□□□ -1.79
PTPRK-212ENST00000434424 RPL22L1Q6P5R6 122 aaKnown RBP3.87□□□□□ -1.79
PTPRK-212ENST00000434424 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
PTPRK-212ENST00000434424 GRPEL2Q8TAA5 225 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BHQ93079 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 MRPS24Q96EL2 167 aaKnown RBP3.87□□□□□ -1.79
PTPRK-212ENST00000434424 S100A13Q99584 98 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BNQ99877 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H2BMQ99879 126 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 TTTY10Q9BZA0 68 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 TRAPPC2LQ9UL33 140 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 NUBP2Q9Y5Y2 271 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 KIAA1109Q2LD37 5005 aa3.87□□□□□ -1.79
PTPRK-212ENST00000434424 DNAH7Q8WXX0 4024 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 IGKV2-24A0A0C4DH68 120 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 G3V2T6 193 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 M0R2N4 97 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 HMGB3O15347 200 aaKnown RBP3.86□□□□□ -1.79
PTPRK-212ENST00000434424 NDUFA3O95167 84 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 RPSAP08865 295 aaKnown RBP3.86□□□□□ -1.79
PTPRK-212ENST00000434424 FXYD3Q14802 87 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 AADACL3Q5VUY0 350 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 UBE2DNLQ8IWF7 75 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 OR13C6PQ8NH95 151 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 GPER1Q99527 375 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 FAM103A1Q9BTL3 118 aaKnown RBP3.86□□□□□ -1.79
PTPRK-212ENST00000434424 COA4Q9NYJ1 87 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 METTL1Q9UBP6 276 aaKnown RBP3.86□□□□□ -1.79
PTPRK-212ENST00000434424 AP4S1Q9Y587 144 aa3.86□□□□□ -1.79
PTPRK-212ENST00000434424 TRAV10A0A0B4J240 114 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 LOC107986453A0A1B0GWG9 222 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 FAM223BA6NKX1 122 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 G3V3Q6 166 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 S1PR2O95136 353 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 UCHL1P09936 223 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 SULT1A3P0DMM9 295 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 SULT1A4P0DMN0 295 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 CRYBA4P53673 196 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 HIST1H4AP62805 103 aaKnown RBP3.85□□□□□ -1.79
PTPRK-212ENST00000434424 CDK5R1Q15078 307 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 C1orf134Q5TEV5 83 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 TMEM244Q5VVB8 128 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 FAM223AQ8IWN6 122 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 OR5D14Q8NGL3 314 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 GPR146Q96CH1 333 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 APLNQ9ULZ1 77 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 KIAA2026Q5HYC2 2103 aa3.85□□□□□ -1.79
PTPRK-212ENST00000434424 IGKV1-9A0A0C4DH69 117 aa3.84□□□□□ -1.79
PTPRK-212ENST00000434424 A0A1W2PNM2 257 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms