RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RBMY1DP0C7P1 496 aaKnown RBP10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 RBMY1A1P0DJD3 496 aaKnown RBP10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 RBMY1CP0DJD4 496 aa10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 TCTAP57738 103 aa10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 SCGB2A2Q13296 93 aa10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 RBMY1FQ15415 496 aaKnown RBP10.33□□□□□ -0.76
APOBEC3D-202ENST00000427494 MYO9AB2RTY4 2548 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 CBY3A6NI87 242 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 CCL24O00175 119 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 CITED2Q99967 270 aaPredicted RBP10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 CSTL1Q9H114 145 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 SORL1Q92673 2214 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 K7EMI3 77 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 FHL3Q13643 280 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 LINC00469Q8N7U9 141 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 C16orf95Q9H693 158 aa10.32□□□□□ -0.76
APOBEC3D-202ENST00000427494 SPAG8Q99932 426 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZMAT4Q9H898 229 aa10.31□□□□□ -0.76
APOBEC3D-202ENST00000427494 TSSC4Q9Y5U2 329 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3D-202ENST00000427494 AKAP9Q99996 3911 aa10.31□□□□□ -0.76
APOBEC3D-202ENST00000427494 IGKCP01834 107 aa10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 HTN1P15515 57 aa10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZNF56Q15929 161 aa10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 NEGR1Q7Z3B1 354 aa10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZNF418Q8TF45 676 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 TOMM6Q96B49 74 aa10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZNF256Q9Y2P7 627 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3D-202ENST00000427494 HELZ2Q9BYK8 2649 aaKnown RBP10.29□□□□□ -0.76
APOBEC3D-202ENST00000427494 DPM2O94777 84 aa10.29□□□□□ -0.76
APOBEC3D-202ENST00000427494 FGF6P10767 208 aa10.29□□□□□ -0.76
APOBEC3D-202ENST00000427494 RPL32P62910 135 aaKnown RBP10.29□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZNF876PQ49A33 203 aa10.29□□□□□ -0.76
APOBEC3D-202ENST00000427494 MPV17L2Q567V2 206 aa10.29□□□□□ -0.76
APOBEC3D-202ENST00000427494 TRAV25A0A0B4J276 109 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 CRYGDP07320 174 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 G0S2P27469 103 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 NMUP48645 174 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 C2orf91Q6ZV80 131 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 SMR3AQ99954 134 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 ITPR2Q14571 2701 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 A0A087WX48 190 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 ZNF25P17030 456 aaPredicted RBP10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 HILS1P60008 231 aa10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 MRPL35Q9NZE8 188 aaKnown RBP10.28□□□□□ -0.76
APOBEC3D-202ENST00000427494 POLR2KP53803 58 aaKnown RBP10.27□□□□□ -0.77
APOBEC3D-202ENST00000427494 BOD1L2Q8IYS8 172 aa10.27□□□□□ -0.77
APOBEC3D-202ENST00000427494 TMEM160Q9NX00 188 aa10.27□□□□□ -0.77
APOBEC3D-202ENST00000427494 HHLA3Q9XRX5 114 aa10.27□□□□□ -0.77
APOBEC3D-202ENST00000427494 SDHAF1A6NFY7 115 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 VCYO14598 125 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 ODF3L2Q3SX64 289 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 C12orf54Q6X4T0 127 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 UNC79Q9P2D8 2635 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 TRAV12-1A0A0B4J245 112 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 M0QY20 66 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 PRM2P04554 102 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 BVES-AS1Q5T3Y7 98 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 DEFB104AQ8WTQ1 72 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 KIR2DL4Q99706 377 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 ACANP16112 2415 aa10.26□□□□□ -0.77
APOBEC3D-202ENST00000427494 INSP01308 110 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 ZC2HC1BQ5TFG8 222 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 MORN3Q6PF18 240 aaPredicted RBP10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 GTSCR1Q86UQ5 136 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 DLEU1O43261 78 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 ZNF415Q09FC8 603 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 ZFP2Q6ZN57 461 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 STHQ8IWL8 128 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 LINC01587Q99440 93 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 CYSLTR1Q9Y271 337 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 CUBNO60494 3623 aa10.25□□□□□ -0.77
APOBEC3D-202ENST00000427494 IGKV2D-26A0A0A0MRZ7 120 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 OR11H12B2RN74 326 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 H7C1H1 209 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 PLNP26678 52 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 ERASQ7Z444 233 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 NEXN-AS1Q8NBZ9 246 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 BAALCQ8WXS3 180 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 TP53TG1Q9Y2A0 90 aa10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
APOBEC3D-202ENST00000427494 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 F8VRH5 84 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 M0R2P5 195 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 NDUFA7O95182 113 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 TMEM208Q9BTX3 173 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 NF1P21359 2839 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 SAP30O75446 220 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 NSUN5P1Q3KNT7 163 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 CLUHP3Q96NS8 147 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 LINC00467Q9BRT7 94 aa10.23□□□□□ -0.77
APOBEC3D-202ENST00000427494 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms